RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 RNF112Q9ULX5 631 aa19.31■□□□□ 0.68
CMTM3-206ENST00000563672 CDC14AQ9UNH5 594 aa19.31■□□□□ 0.68
CMTM3-206ENST00000563672 MAN2B2Q9Y2E5 1009 aa19.31■□□□□ 0.68
CMTM3-206ENST00000563672 PTRH2Q9Y3E5 179 aaKnown RBP19.31■□□□□ 0.68
CMTM3-206ENST00000563672 DYRK1BQ9Y463 629 aa19.31■□□□□ 0.68
CMTM3-206ENST00000563672 IKBKGQ9Y6K9 419 aa19.31■□□□□ 0.68
CMTM3-206ENST00000563672 MAU2Q9Y6X3 613 aa19.31■□□□□ 0.68
CMTM3-206ENST00000563672 TRBC2A0A5B9 178 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 CCDC189A1A4V9 331 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 POC1B-GALNT4F8VUJ3 575 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 FOXS1O43638 330 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 WDR47O94967 919 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 PRB1P04280 392 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 UMODP07911 640 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 FOLR3P41439 243 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 MAGEA12P43365 314 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 FOXL2P58012 376 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 SNRPNP63162 240 aaKnown RBP19.3■□□□□ 0.68
CMTM3-206ENST00000563672 MEF2AQ02078 507 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-206ENST00000563672 NKG7Q16617 165 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 FAM83EQ2M2I3 478 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 NXPE4Q6UWF7 544 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 APLFQ8IW19 511 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-206ENST00000563672 CAMKVQ8NCB2 501 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 ZNF740Q8NDX6 193 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 GPR78Q96P69 363 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 SPNS1Q9H2V7 528 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 CD274Q9NZQ7 290 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 TUBD1Q9UJT1 453 aa19.3■□□□□ 0.68
CMTM3-206ENST00000563672 MRPS2Q9Y399 296 aaKnown RBP19.3■□□□□ 0.68
CMTM3-206ENST00000563672 MDC1Q14676 2089 aaKnown RBP19.29■□□□□ 0.68
CMTM3-206ENST00000563672 VSTM2BA6NLU5 285 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 EIF4E1BA6NMX2 242 aaKnown RBP19.29■□□□□ 0.68
CMTM3-206ENST00000563672 KERAO60938 352 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 C1QL1O75973 258 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 IPO13O94829 963 aaKnown RBP19.29■□□□□ 0.68
CMTM3-206ENST00000563672 KLHL2O95198 593 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 STATHP02808 62 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 MYBL2P10244 700 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 SFTPCP11686 197 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 CNTFP26441 200 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 TNFRSF8P28908 595 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 REEP5Q00765 189 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 TMEM214Q6NUQ4 689 aaKnown RBP19.29■□□□□ 0.68
CMTM3-206ENST00000563672 ASPGQ86U10 573 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 RHEBL1Q8TAI7 183 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 SLC13A3Q8WWT9 602 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 COL26A1Q96A83 441 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 SPSB2Q99619 263 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 MACROD1Q9BQ69 325 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 DRC3Q9H069 523 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 EPB41L4BQ9H329 900 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 CNOT10Q9H9A5 744 aaKnown RBP19.29■□□□□ 0.68
CMTM3-206ENST00000563672 WWOXQ9NZC7 414 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 CTSFQ9UBX1 484 aa19.29■□□□□ 0.68
CMTM3-206ENST00000563672 IGLV3-12A0A075B6K2 115 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 EXOC1LA0A1B0GW35 172 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 OR1F1O43749 312 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 STK16O75716 305 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 KRT38O76015 456 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 MTHFD2P13995 350 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 GNAZP19086 355 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 GCAP28676 217 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 SCTRP47872 440 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 HSPA7P48741 367 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 CDC16Q13042 620 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 KCNAB2Q13303 367 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 DSG2Q14126 1118 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 SLC29A2Q14542 456 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 ACAP2Q15057 778 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 NDUFA9Q16795 377 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 FBXO48Q5FWF7 155 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 SLCO4C1Q6ZQN7 724 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 TAOK1Q7L7X3 1001 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 TMPRSS11BQ86T26 416 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 RAB43Q86YS6 212 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 GSPT2Q8IYD1 628 aaKnown RBP19.28■□□□□ 0.68
CMTM3-206ENST00000563672 ESAMQ96AP7 390 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 IP6K3Q96PC2 410 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 AIF1LQ9BQI0 150 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 CAPS2Q9BXY5 557 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 DNAJC11Q9NVH1 559 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 GPRC5BQ9NZH0 403 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 NUDT4Q9NZJ9 180 aa19.28■□□□□ 0.68
CMTM3-206ENST00000563672 NXT1Q9UKK6 140 aaKnown RBP19.28■□□□□ 0.68
CMTM3-206ENST00000563672 SPTA1P02549 2419 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 A0A0A6YYC8 382 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-206ENST00000563672 I3L1I5 382 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-206ENST00000563672 PRPF4O43172 522 aaKnown RBP eCLIP19.27■□□□□ 0.683e-8■■■■■ 27.8
CMTM3-206ENST00000563672 S100BP04271 92 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-206ENST00000563672 C1GALT1C1LP0DN25 315 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 FBLP22087 321 aaKnown RBP19.27■□□□□ 0.68
CMTM3-206ENST00000563672 OTX2P32243 289 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 AHRP35869 848 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 PWP1Q13610 501 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 PPP1R32Q7Z5V6 425 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 MRGPREQ86SM8 312 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 TBC1D19Q8N5T2 526 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 AMER3Q8N944 861 aa19.27■□□□□ 0.68
CMTM3-206ENST00000563672 KCT2Q8NC54 265 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms