RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 H3BMM5 538 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 MT3P25713 68 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 SSTR1P30872 391 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 SOAT1P35610 550 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 OR1D5P58170 312 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 CASC4Q6P4E1 433 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 FUT10Q6P4F1 479 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 C4orf19Q8IY42 314 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 LSMEM2Q8N112 164 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 SLC26A7Q8TE54 656 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 SMAP2Q8WU79 429 aaPredicted RBP4.87□□□□□ -1.63
LINC00557-201ENST00000563184 C2orf40Q9H1Z8 148 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 P2RY12Q9H244 342 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 FGF22Q9HCT0 170 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 IARS2Q9NSE4 1012 aaKnown RBP4.87□□□□□ -1.63
LINC00557-201ENST00000563184 PLCXD1Q9NUJ7 323 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 CACNG5Q9UF02 275 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 LIPT1Q9Y234 373 aa4.87□□□□□ -1.63
LINC00557-201ENST00000563184 MYH15Q9Y2K3 1946 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 TRBV4-1A0A0J9YWV2 114 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 A0A1W2PR80 420 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 FAM170AA1A519 330 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 NME6O75414 186 aaPredicted RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 ZNF821O75541 412 aaPredicted RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 IGLV1-44P01699 117 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 EEF2P13639 858 aaKnown RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 CCND3P30281 292 aaPredicted RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 CETN2P41208 172 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 SNRPD1P62314 119 aaKnown RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 HYAL1Q12794 435 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 TRA2AQ13595 282 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 TMEM187Q14656 261 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 SLMAPQ14BN4 828 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 PODNL1Q6PEZ8 512 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 LINC00696Q6ZRV3 163 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 SLC24A5Q71RS6 500 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 PHLDB2Q86SQ0 1253 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 PRUNE1Q86TP1 453 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 HOGA1Q86XE5 327 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 MEX3DQ86XN8 651 aaKnown RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 FAM89BQ8N5H3 189 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 GBP7Q8N8V2 638 aaPredicted RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 MRGPRDQ8TDS7 321 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 AFAP1L1Q8TED9 768 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 ZNRF4Q8WWF5 429 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 ZNF486Q96H40 463 aaPredicted RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 FAM218AQ96MZ4 157 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 UTP14AQ9BVJ6 771 aaKnown RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 LSG1Q9H089 658 aaKnown RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 RNF121Q9H920 327 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 TXLNGQ9NUQ3 528 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 SLCO1C1Q9NYB5 712 aa4.86□□□□□ -1.63
LINC00557-201ENST00000563184 NOCTQ9UK39 431 aaKnown RBP4.86□□□□□ -1.63
LINC00557-201ENST00000563184 TRAV18A0A075B6X5 111 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 A0A0B4J203 849 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ILVBLA1L0T0 632 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 CTDSPLO15194 276 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 RPL35AP18077 110 aaKnown RBP4.85□□□□□ -1.63
LINC00557-201ENST00000563184 RBMS1P29558 406 aaKnown RBP4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ATP5DP30049 168 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ATP12AP54707 1039 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 PAX9P55771 341 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 CLDN17P56750 224 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 SRSF9Q13242 221 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC00557-201ENST00000563184 TMEM132DQ14C87 1099 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 PTPN14Q15678 1187 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 GFI1BQ5VTD9 330 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 KLHL10Q6JEL2 608 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 C5orf24Q7Z6I8 188 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 SYCP3Q8IZU3 236 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 GPC2Q8N158 579 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 RAB42Q8N4Z0 105 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 OR7G3Q8NG95 312 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 SAP25Q8TEE9 199 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 NR4A3Q92570 626 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 VMP1Q96GC9 406 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 MAGED4Q96JG8 741 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 TSSK2Q96PF2 358 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 NKX3-1Q99801 234 aaPredicted RBP4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ASCL2Q99929 193 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ATG101Q9BSB4 218 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ALKBH7Q9BT30 221 aaPredicted RBP4.85□□□□□ -1.63
LINC00557-201ENST00000563184 UBQLN3Q9H347 655 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 C5orf66Q9H5L9 145 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 TMEM206Q9H813 350 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 TBC1D13Q9NVG8 400 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 IL36AQ9UHA7 158 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 PILRBQ9UKJ0 227 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ELF5Q9UKW6 265 aaPredicted RBP4.85□□□□□ -1.63
LINC00557-201ENST00000563184 GPR132Q9UNW8 380 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 AGTPBP1Q9UPW5 1226 aa4.85□□□□□ -1.63
LINC00557-201ENST00000563184 ANTXRLA6NF34 631 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 KBTBD13C9JR72 458 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 NPIPA3F8WFD2 350 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 CCER2I3L3R5 266 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 KRT86O43790 486 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 SOCS5O75159 536 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 CLDN1O95832 211 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 SLC16A8O95907 504 aa4.84□□□□□ -1.63
LINC00557-201ENST00000563184 YES1P07947 543 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms