RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	CWC25	Q9NXE8	425 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	FLRT3	Q9NZU0	649 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	CDH7	Q9ULB5	785 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	CHKB	Q9Y259	395 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	TRO	Q12816	1431 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	PTCH1	Q13635	1447 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	NCOA3	Q9Y6Q9	1424 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	ARHGAP35	Q9NRY4	1499 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	SYCP2	Q9BX26	1530 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	SMCHD1	A6NHR9	2005 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	PMS2P5	A8MQ11	134 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ERVV-2	B6SEH9	535 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	FPGT	O14772	594 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	FLRT2	O43155	660 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	BAG3	O95817	575 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	CD48	P09326	243 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ERVK-10	P10266	1014 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	LHCGR	P22888	699 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ITGA3	P26006	1051 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	TCF7	P36402	384 aa	Predicted RBP	4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	SLMAP	Q14BN4	828 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	TWISTNB	Q3B726	338 aa	Predicted RBP	4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	KIAA1644	Q3SXP7	199 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ANKRD20A4	Q4UJ75	823 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ANKRD20A8P	Q5CZ79	823 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ANKRD20A2	Q5SQ80	823 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ANKRD20A1	Q5TYW2	823 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ANKRD20A3	Q5VUR7	823 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ARHGEF16	Q5VV41	709 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	LYSMD4	Q5XG99	296 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	FAM166A	Q6J272	317 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	GBP6	Q6ZN66	633 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ANKRD33	Q7Z3H0	272 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	AMIGO1	Q86WK6	493 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	CCDC170	Q8IYT3	715 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	OR13C3	Q8NGS6	347 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	HPSE2	Q8WWQ2	592 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	SEPT1	Q8WYJ6	367 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	P2RX5	Q93086	422 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	PGM2	Q96G03	612 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	NDN	Q99608	321 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	C2orf40	Q9H1Z8	148 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	CPVL	Q9H3G5	476 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	CHST11	Q9NPF2	352 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.87	□□□□□ -1.63
TCF12-223	ENST00000561235		R4GN57	208 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	IGSF1	Q8N6C5	1336 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	STK36	Q9NRP7	1315 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	ERVK-7	P63135	1459 aa		4.87	□□□□□ -1.63
TCF12-223	ENST00000561235	SHANK3	Q9BYB0	1731 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	YDJC	A8MPS7	323 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	PRSS46	E5RG02	174 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	SLC30A4	O14863	429 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	STX6	O43752	255 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	TRMU	O75648	421 aa	Known RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	DFFB	O76075	338 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	APOH	P02749	345 aa	Predicted RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	GPI	P06744	558 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	EPOR	P19235	508 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	SOAT1	P35610	550 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	MAP2K2	P36507	400 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	LBX1	P52954	281 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	FOLH1	Q04609	750 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	TRAP1	Q12931	704 aa	Known RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	GPR33	Q49SQ1	333 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	GTDC1	Q4AE62	458 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	CCDC158	Q5M9N0	1113 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	CTR9	Q6PD62	1173 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	C11orf88	Q6PI97	169 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	C15orf39	Q6ZRI6	1047 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	PIGW	Q7Z7B1	504 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	SYCP3	Q8IZU3	236 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	DBF4B	Q8NFT6	615 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	FIBIN	Q8TAL6	211 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	TSACC	Q96A04	125 aa	Predicted RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	GDAP1L1	Q96MZ0	367 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	RIMS4	Q9H426	269 aa	Predicted RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	WWOX	Q9NZC7	414 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	PKD2L2	Q9NZM6	624 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	DISP2	A7MBM2	1401 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	RGPD1	P0DJD0	1748 aa		4.86	□□□□□ -1.63
TCF12-223	ENST00000561235	CHD2	O14647	1828 aa	Known RBP	4.86	□□□□□ -1.63
TCF12-223	ENST00000561235		A0A0G2JLW4	131 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235		F8VVB4	439 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235		F8VWA3	439 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	IKBKB	O14920	756 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	NADK	O95544	446 aa	Predicted RBP	4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	EDN1	P05305	212 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CDX1	P47902	265 aa	Predicted RBP	4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CACNG1	Q06432	222 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	RBBP7	Q16576	425 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	TYSND1	Q2T9J0	566 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	UGT3A1	Q6NUS8	523 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CASC4	Q6P4E1	433 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CASC1	Q6TDU7	716 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	TUSC5	Q8IXB3	177 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms