RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SCN2BO60939 215 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 SEMA3DO95025 777 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 ATP6V1B2P21281 511 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 PSMB5P28074 263 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 PTPN6P29350 595 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 ATXN3P54252 364 aaPredicted RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 ABATP80404 500 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 RUNDC3AQ59EK9 446 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 COMMD6Q7Z4G1 85 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 SLC22A18ASQ8N1D0 253 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 CXorf40BQ96DE9 158 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 SHDQ96IW2 340 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 LRGUKQ96M69 825 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 GUCD1Q96NT3 240 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 NELL2Q99435 816 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 KCTD14Q9BQ13 255 aaPredicted RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 TWSG1Q9GZX9 223 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 TMEM168Q9H0V1 697 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 PCDHB3Q9Y5E6 796 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 SNX13Q9Y5W8 968 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 TRIOBPQ9H2D6 2365 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 NUMA1Q14980 2115 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 SCAMP1O15126 338 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 SCAMP2O15127 329 aaKnown RBP12.39□□□□□ -0.43
SNX1-211ENST00000560829 ARPC2O15144 300 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 LRATO95237 230 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 EML2O95834 649 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 TBX6O95947 436 aaPredicted RBP12.39□□□□□ -0.43
SNX1-211ENST00000560829 TGFB1P01137 390 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 AK4P27144 223 aaPredicted RBP12.39□□□□□ -0.43
SNX1-211ENST00000560829 SLC7A1P30825 629 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 ACTR1BP42025 376 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 TRPC1P48995 793 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 WNT3P56703 355 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 ACTR1AP61163 376 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 CSNK1G2P78368 415 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 SELPLGQ14242 412 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 Q7L0L9 218 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 NRROSQ86YC3 692 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 ANKRD53Q8N9V6 530 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 GPR156Q8NFN8 814 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 FAM174AQ8TBP5 190 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 ORAI3Q9BRQ5 295 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 REXO4Q9GZR2 422 aaKnown RBP12.39□□□□□ -0.43
SNX1-211ENST00000560829 OR51B5Q9H339 312 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 XKR8Q9H6D3 395 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 OR6C2Q9NZP2 312 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 MCM8Q9UJA3 840 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 RIMS3Q9UJD0 308 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.39□□□□□ -0.43
SNX1-211ENST00000560829 ATG2BQ96BY7 2078 aa12.39□□□□□ -0.43
SNX1-211ENST00000560829 IGHV1OR15-9A0A0B4J2B8 117 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 IGKV1-8A0A0C4DH67 115 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 A0A1W2PPC4 97 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 ANKDD1BA6NHY2 528 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 H7BY64 318 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 PEX1O43933 1283 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 CAPNS1P04632 268 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 F3P13726 295 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 COX7A2P14406 83 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 SHMT2P34897 504 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 MTPNP58546 118 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 UBXN2BQ14CS0 331 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 RBBP5Q15291 538 aaKnown RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 SF1Q15637 639 aaKnown RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 PGS1Q32NB8 556 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 AASDHQ4L235 1098 aaPredicted RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 DEPDC1Q5TB30 811 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 OR4F3Q6IEY1 312 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 CYP2R1Q6VVX0 501 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 RD3Q7Z3Z2 195 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 ADHFE1Q8IWW8 467 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 CCL4L1Q8NHW4 92 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 DNAJC9Q8WXX5 260 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 SLCO4A1Q96BD0 722 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 COQ8BQ96D53 544 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 ZNF583Q96ND8 569 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 CCDC115Q96NT0 180 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 PRAP1Q96NZ9 151 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 SARGQ9BW04 601 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 GPR174Q9BXC1 333 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 MS4A8Q9BY19 250 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 ARMC1Q9NVT9 282 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 ZNF624Q9P2J8 865 aaPredicted RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 EGFL7Q9UHF1 273 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 ATP6V1HQ9UI12 483 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 AP4S1Q9Y587 144 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 PCDHB14Q9Y5E9 798 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 PRAMEF33A0A0G2JMD5 474 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 SPTY2D1-AS1A0A0U1RR47 76 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 GNG14A0A1W2PPG7 69 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 FAM170BA6NMN3 283 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 AKAP10O43572 662 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 SH3BGRLO75368 114 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms