RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 SEC14L1Q92503 715 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 OR2A14Q96R47 310 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 PITPNM3Q9BZ71 974 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 L2HGDHQ9H9P8 463 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 CHRAC1Q9NRG0 131 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 MARCH4Q9P2E8 410 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 IFT80Q9P2H3 777 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 DHCR7Q9UBM7 475 aaKnown RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 ANAPC5Q9UJX4 755 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 TTC7AQ9ULT0 858 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 G3BP2Q9UN86 482 aaKnown RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 RUVBL2Q9Y230 463 aaKnown RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 CDYLQ9Y232 598 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 PADI2Q9Y2J8 665 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 PTRH2Q9Y3E5 179 aaKnown RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 DMRT1Q9Y5R6 373 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 NBASA2RRP1 2371 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 FLNBO75369 2602 aaKnown RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 MED13Q9UHV7 2174 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 A0A0J9YY10 115 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 ERI2A8K979 691 aaKnown RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 GOLGA8KD6RF30 607 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 F8W8V4 182 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 GOLGA8TH3BQL2 631 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 QSOX1O00391 747 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 ZSCAN9O15535 394 aaPredicted RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 ALOX12BO75342 701 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 VPS4BO75351 444 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 NDUFS3O75489 264 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 APOA4P06727 396 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 TPBGLP0DKB5 382 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 MAGP20916 626 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 ADRA1DP25100 572 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 PKLRP30613 574 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 STIP1P31948 543 aaKnown RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 CCR7P32248 378 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 CXCR5P32302 372 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 RPL22P35268 128 aaKnown RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 RORAP35398 523 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 FOLR3P41439 243 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 BDKRB1P46663 353 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 KCNJ1P48048 391 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 EIF3BP55884 814 aaKnown RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 LAMB3Q13751 1172 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 NCF4Q15080 339 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 OASLQ15646 514 aaKnown RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 ZNF789Q5FWF6 425 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 LYPLAL1Q5VWZ2 237 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 IZUMO3Q5VZ72 239 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 KRTAP5-11Q6L8G4 156 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 CNSTQ6PJW8 725 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 PACS1Q6VY07 963 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 SHISA6Q6ZSJ9 500 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 RAB43Q86YS6 212 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 APLFQ8IW19 511 aaPredicted RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 KLHDC8BQ8IXV7 354 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 TBC1D21Q8IYX1 336 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 FDCSPQ8NFU4 85 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 OR4L1Q8NH43 312 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 OR5K2Q8NHB8 316 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 SGSM3Q96HU1 749 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 GNRHR2Q96P88 292 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 NDC1Q9BTX1 674 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 TSSK1BQ9BXA7 367 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 NLNQ9BYT8 704 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 TSGA10Q9BZW7 698 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 SLAMF7Q9NQ25 335 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 CATSPERZQ9NTU4 200 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 ABCF3Q9NUQ8 709 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 PAK5Q9P286 719 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 POLG2Q9UHN1 485 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 SLC39A10Q9ULF5 831 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 VPS4AQ9UN37 437 aa7.04□□□□□ -1.28
SPG11-213ENST00000558988 SNRNP200O75643 2136 aaKnown RBP7.04□□□□□ -1.28
SPG11-213ENST00000558988 CCDC88CQ9P219 2028 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 SLC5A10A0PJK1 596 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 BLACEA4D250 179 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 PEX12O00623 359 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 CD3EAPO15446 510 aaKnown RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 CEP104O60308 925 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 KDM1AO60341 852 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 AGFG2O95081 481 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 FGGP02679 453 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 F7P08709 466 aaPredicted RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 HBQ1P09105 142 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 RAB40ALP0C0E4 278 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 GNLYP22749 145 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 MCM3P25205 808 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 MGAT1P26572 445 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 PSMB5P28074 263 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 ACADLP28330 430 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 NMBRP28336 390 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 PEBP1P30086 187 aaKnown RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 PPARGP37231 505 aaPredicted RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 RRADP55042 308 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 DCDP81605 110 aaKnown RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 SF1Q15637 639 aaKnown RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 AARS2Q5JTZ9 985 aaKnown RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 CASC4Q6P4E1 433 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms