RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 SLC15A5A6NIM6 579 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 H3BMM5 538 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 H3BNX3 289 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 SLC28A1O00337 649 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 SLC22A2O15244 555 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 TEX28O15482 410 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 PSMD3O43242 534 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 PDE9AO76083 593 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 STBD1O95210 358 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 CXCL10P02778 98 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 PGK2P07205 417 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 CHRNGP07510 517 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 CDH1P12830 882 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 F3P13726 295 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF18P17022 549 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 CDH3P22223 829 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 EPHA2P29317 976 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 DUTP33316 252 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 HSPA1LP34931 641 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 FMO5P49326 533 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 PEX5P50542 639 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 NR0B1P51843 470 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 PGGT1BP53609 377 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 HUNKP57058 714 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 B3GALT5-AS1P59052 145 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 TRA2BP62995 288 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 EEF1A1P68104 462 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 CETN1Q12798 172 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 DLG1Q12959 904 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 KRT31Q15323 416 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 EEF1A1P5Q5VTE0 462 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 IRGCQ6NXR0 463 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 NBPF5PQ86XG9 351 aaPredicted RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 STHQ8IWL8 128 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 EID3Q8N140 333 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 CLIP4Q8N3C7 705 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 OR1J1Q8NGS3 322 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 OLIG1Q8TAK6 271 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 GRHL3Q8TE85 626 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ANP32BQ92688 251 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ESAMQ96AP7 390 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 SLCO4A1Q96BD0 722 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ALG14Q96F25 216 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 C16orf58Q96GQ5 468 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 RBM41Q96IZ5 413 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 MAP3K3Q99759 626 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 RTP3Q9BQQ7 232 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ALKBH7Q9BT30 221 aaPredicted RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 NTMT1Q9BV86 223 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 CCSER1Q9C0I3 900 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 SDCBP2Q9H190 292 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 RNF121Q9H920 327 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 LRRC4Q9HBW1 653 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 APOBEC3GQ9HC16 384 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 PPANQ9NQ55 473 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 FAM207AQ9NSI2 230 aaPredicted RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 FAM212BQ9NTI7 297 aaPredicted RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 PIGVQ9NUD9 493 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 DCAF16Q9NXF7 216 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 TMOD3Q9NYL9 352 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ANKMY1Q9P2S6 941 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ZDHHC2Q9UIJ5 367 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 DUSP12Q9UNI6 340 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 SH3GLB1Q9Y371 365 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 RRP15Q9Y3B9 282 aaKnown RBP2.9□□□□□ -1.95
TRAV28-201ENST00000557548 ANKRD61A6NGH8 418 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SRRM3A6NNA2 597 aaPredicted RBP2.89□□□□□ -1.95
TRAV28-201ENST00000557548 NPIPA3F8WFD2 350 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SOCS2O14508 198 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SCO2O43819 266 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SSX5O60225 188 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 PAPSS2O95340 614 aaPredicted RBP2.89□□□□□ -1.95
TRAV28-201ENST00000557548 BAG4O95429 457 aaKnown RBP2.89□□□□□ -1.95
TRAV28-201ENST00000557548 GLUD1P00367 558 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 AK1P00568 194 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 PRSS2P07478 247 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 MMP10P09238 476 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 TMEM191BP0C7N4 346 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 TSPY4P0CV99 314 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 TSPY10P0CW01 314 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF12P17014 697 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF23P17027 643 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 ITGB6P18564 788 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 FUT1P19526 365 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 DNAJB1P25685 340 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 CCND2P30279 289 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SRD5A2P31213 254 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SFTPDP35247 375 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 PRPHP41219 470 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SSR1P43307 286 aaKnown RBP2.89□□□□□ -1.95
TRAV28-201ENST00000557548 MAGEA4P43358 317 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 GLUD2P49448 558 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 FUT6P51993 359 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 CDH11P55287 796 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SSBP2P81877 361 aaPredicted RBP2.89□□□□□ -1.95
TRAV28-201ENST00000557548 HMGN5P82970 282 aaKnown RBP2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SLC3A1Q07837 685 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 TRAP1Q12931 704 aaKnown RBP2.89□□□□□ -1.95
TRAV28-201ENST00000557548 SPP2Q13103 211 aa2.89□□□□□ -1.95
TRAV28-201ENST00000557548 DPYSQ14117 519 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms