RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 GREM1O60565 184 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 INMTO95050 263 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 ALPLP05186 524 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 CTSLP07711 333 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PTNP21246 168 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PFN3P60673 137 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PAGE2BQ5JRK9 111 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PLEKHS1Q5SXH7 462 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 C8orf82Q6P1X6 216 aaPredicted RBP14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PTRH1Q86Y79 214 aaKnown RBP14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 HIPK1Q86Z02 1210 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 MSRB3Q8IXL7 192 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 GIPC3Q8TF64 312 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 XAGE5Q8WWM1 108 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 NPLQ9BXD5 320 aaPredicted RBP14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 SLC2A11Q9BYW1 496 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 NTN4Q9HB63 628 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 KCNK6Q9Y257 313 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PRUNE2Q8WUY3 3088 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 A0A096LPI6 279 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PNMA8CA0A1B0GUJ8 204 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PRAMEF4O60810 478 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PRNPP04156 253 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PIM1P11309 404 aaPredicted RBP14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 ZNF30P17039 623 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 FUT4P22083 530 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 CLCNKAP51800 687 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 APOFQ13790 326 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PRAMEF9Q5VWM5 478 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 ZDHHC20Q5W0Z9 365 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 PIWIL3Q7Z3Z3 882 aaKnown RBP14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 C11orf65Q8NCR3 313 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 NFKBIDQ8NI38 313 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 STON2Q8WXE9 905 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 APOL4Q9BPW4 351 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 WDR70Q9NW82 654 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 GPSM3Q9Y4H4 160 aa14.8□□□□□ -0.04
TMEM55B-207ENST00000557041 ANKRD28O15084 1053 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 AP1G1O43747 822 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 C6P13671 934 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 ZFP36L2P47974 494 aaKnown RBP14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 VLDLRP98155 873 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 CEP68Q76N32 757 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 TRIM46Q7Z4K8 759 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 MMP21Q8N119 569 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 OR5AR1Q8NGP9 310 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 ZNF480Q8WV37 535 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 NXPE3Q969Y0 559 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 FERD3LQ96RJ6 166 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 LHPPQ9H008 270 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 EQTNQ9NQ60 294 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 TM7SF3Q9NS93 570 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 DCAF13Q9NV06 445 aaKnown RBP14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 THUMPD1Q9NXG2 353 aaKnown RBP14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 TNFRSF11BO00300 401 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 OR1F1O43749 312 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 NUAK1O60285 661 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 MATN1P21941 496 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 EPHA2P29317 976 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 UGT8Q16880 541 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 C12orf40Q86WS4 652 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 RNF130Q86XS8 419 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 TFGQ92734 400 aaPredicted RBP14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 RAD21L1Q9H4I0 556 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 ERVK-18Q9QC07 812 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 TMEM247A6NEH6 219 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 DLGAP1O14490 977 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 AREL1O15033 823 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 CCNDBP1O95273 360 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 NRIP1P48552 1158 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 NPTX1Q15818 432 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 ZXDCQ2QGD7 858 aaPredicted RBP14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 ANKDD1AQ495B1 522 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 DEF8Q6ZN54 512 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 SPRED1Q7Z699 444 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 C17orf64Q86WR6 236 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 ZCCHC7Q8N3Z6 543 aaKnown RBP14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 STX19Q8N4C7 294 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 LEMD2Q8NC56 503 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 WDR48Q8TAF3 677 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 DOK4Q8TEW6 326 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 SMAD5Q99717 465 aaKnown RBP14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 SLC52A3Q9NQ40 469 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 DUSP12Q9UNI6 340 aa14.79□□□□□ -0.04
TMEM55B-207ENST00000557041 H0YJX3 145 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 TUBA4AP68366 448 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 NPAS3Q8IXF0 933 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 TOX2Q96NM4 488 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 RHNO1Q9BSD3 238 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 AMBRA1Q9C0C7 1298 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 RDH14Q9HBH5 336 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 WDR87Q6ZQQ6 2873 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 TRBV5-4A0A0C4DH59 114 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 H3BMQ9 156 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 CD22P20273 847 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 PSMB5P28074 263 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 IMPA1P29218 277 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 HPCAP84074 193 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 NR1D2Q14995 579 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms