RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	PEX26	Q7Z412	305 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	GALNTL5	Q7Z4T8	443 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	ADCK2	Q7Z695	626 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	ANKRD37	Q7Z713	158 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	SIAH3	Q8IW03	269 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	SLC5A8	Q8N695	610 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	BIRC8	Q96P09	236 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	PKP4	Q99569	1192 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	TRIM51	Q9BSJ1	452 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	MMP25	Q9NPA2	562 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	PPT2	Q9UMR5	302 aa		11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.94	□□□□□ -0.5
SHMT2-223	ENST00000556689	MED13L	Q71F56	2210 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	OR2W5	A6NFC9	320 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	GABRR3	A8MPY1	467 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	MIF4GD	A9UHW6	222 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	CDK2AP1	O14519	115 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	ADAM10	O14672	748 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	HAT1	O14929	419 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	PFDN6	O15212	129 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	P2RX6	O15547	441 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	ZNHIT1	O43257	154 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	NEURL1	O76050	574 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	NSA2	O95478	260 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	CAT	P04040	527 aa	Known RBP	11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	BCL6	P41182	706 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	XCR1	P46094	333 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	SESN2	P58004	480 aa	Predicted RBP	11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	MAPKAPK3	Q16644	382 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	KLHL38	Q2WGJ6	581 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	ACSBG2	Q5FVE4	666 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	MRNIP	Q6NTE8	343 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	C3P1	Q6ZMU1	363 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	PLD3	Q8IV08	490 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	LRRC8A	Q8IWT6	810 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	OTUD6B	Q8N6M0	293 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	PPFIBP2	Q8ND30	876 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	ATG4A	Q8WYN0	398 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	FAM136A	Q96C01	138 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	DMRTA2	Q96SC8	542 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	NPAS2	Q99743	824 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	TREX2	Q9BQ50	279 aa	Predicted RBP	11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	LACRT	Q9GZZ8	138 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	TREX1	Q9NSU2	369 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	ABCF3	Q9NUQ8	709 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	LRFN1	Q9P244	771 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	ZNF148	Q9UQR1	794 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	PCNX1	Q96RV3	2341 aa		11.93	□□□□□ -0.5
SHMT2-223	ENST00000556689	NCOA6	Q14686	2063 aa	Predicted RBP	11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689		E7ENX8	843 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689		H7BY64	318 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	SMAP	O00193	183 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	LIAS	O43766	372 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	MAN1A2	O60476	641 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	DIAPH2	O60879	1101 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	NIPSNAP2	O75323	286 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	SLC16A8	O95907	504 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	ESR1	P03372	595 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	ETS1	P14921	441 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	NMBR	P28336	390 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	DEK	P35659	375 aa	Known RBP	11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	NPY2R	P49146	381 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	TAS2R50	P59544	299 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	SNRPN	P63162	240 aa	Known RBP	11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	CRADD	P78560	199 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	HSF1	Q00613	529 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	TAP2	Q03519	686 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	OASL	Q15646	514 aa	Known RBP	11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	NSDHL	Q15738	373 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	THEMIS2	Q5TEJ8	643 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	PAPD4	Q6PIY7	484 aa	Known RBP	11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	PCGF5	Q86SE9	256 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	CHERP	Q8IWX8	916 aa	Known RBP	11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	SYCE1	Q8N0S2	351 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	PLPP5	Q8NEB5	264 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	ZNF480	Q8WV37	535 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	POM121	Q96HA1	1249 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	PRAP1	Q96NZ9	151 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	TCF12	Q99081	682 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	LPAR4	Q99677	370 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	OLFM1	Q99784	485 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	CDCP1	Q9H5V8	836 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	TMEM184C	Q9NVA4	438 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	HCN3	Q9P1Z3	774 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	PAK5	Q9P286	719 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	GALP	Q9UBC7	116 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	CRYL1	Q9Y2S2	319 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	ASB1	Q9Y576	335 aa		11.92	□□□□□ -0.5
SHMT2-223	ENST00000556689	CPAMD8	Q8IZJ3	1885 aa		11.91	□□□□□ -0.5
SHMT2-223	ENST00000556689	KCNE1B	A0A087WTH5	132 aa		11.91	□□□□□ -0.5
SHMT2-223	ENST00000556689	FOXO6	A8MYZ6	492 aa		11.91	□□□□□ -0.5
SHMT2-223	ENST00000556689		E5RI56	91 aa		11.91	□□□□□ -0.5
SHMT2-223	ENST00000556689	SGK494	L7N484	410 aa		11.91	□□□□□ -0.5
SHMT2-223	ENST00000556689	AP3B1	O00203	1094 aa		11.91	□□□□□ -0.5
SHMT2-223	ENST00000556689	NDC80	O14777	642 aa		11.91	□□□□□ -0.5
SHMT2-223	ENST00000556689	VAPB	O95292	243 aa		11.91	□□□□□ -0.5

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