RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 HSD17B3P37058 310 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 DNASE1L3Q13609 305 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 COL9A2Q14055 689 aaPredicted RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 GRM7Q14831 915 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 RASA2Q15283 850 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 FAM83EQ2M2I3 478 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 CRTC2Q53ET0 693 aaPredicted RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 CATSPEREQ5SY80 951 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 YOD1Q5VVQ6 348 aaPredicted RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 PRAMEF9Q5VWM5 478 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 SULT1C3Q6IMI6 304 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 NXPE4Q6UWF7 544 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 FAM198BQ6UWH4 519 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 CCDC81Q6ZN84 652 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 SLCO4C1Q6ZQN7 724 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 SH2D5Q6ZV89 423 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 FRA10AC1Q70Z53 315 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 TAOK1Q7L7X3 1001 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 TDRPQ86YL5 185 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 TCAIMQ8N3R3 496 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 TMEM151AQ8N4L1 468 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 PROKR1Q8TCW9 393 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 N4BP2L2Q92802 583 aaPredicted RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 MR1Q95460 341 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 ALKBH8Q96BT7 664 aaKnown RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 MTBPQ96DY7 904 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 CLIP3Q96DZ5 547 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 TM4SF19Q96DZ7 209 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 C10orf90Q96M02 699 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 EGFL8Q99944 293 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 DPH2Q9BQC3 489 aaPredicted RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 EFHD1Q9BUP0 239 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 GPR87Q9BY21 358 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 PARD6BQ9BYG5 372 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 VPS11Q9H270 941 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 SPNS1Q9H2V7 528 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 GPN2Q9H9Y4 310 aaPredicted RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 ZNF358Q9NW07 568 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 NUDT4Q9NZJ9 180 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 DHCR7Q9UBM7 475 aaKnown RBP9.21□□□□□ -0.94
SRP54-210ENST00000556380 RAB21Q9UL25 225 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 RNF112Q9ULX5 631 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 SRPK3Q9UPE1 567 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 ASB1Q9Y576 335 aa9.21□□□□□ -0.94
SRP54-210ENST00000556380 FER1L5A0AVI2 2057 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 PABPN1LA6NDY0 278 aaKnown RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 UBXN8O00124 270 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 DSCR3O14972 297 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 NKX2-8O15522 239 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 P2RX6O15547 441 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 STK16O75716 305 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 IPO13O94829 963 aaKnown RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 KLK3P07288 261 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 RAB40ALP0C0E4 278 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 SBK3P0C264 359 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 NCF1P14598 390 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 PTPN4P29074 926 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 DLSTP36957 453 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 BCL6P41182 706 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 GLRBP48167 497 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 CCR8P51685 355 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 ARSFP54793 590 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 RPS15AP62244 130 aaKnown RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 SNRPNP63162 240 aaKnown RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 CXADRP78310 365 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 NFKB2Q00653 900 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 RELBQ01201 579 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 PCDH1Q08174 1060 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 NAA30Q147X3 362 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 HKDC1Q2TB90 917 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 FAM214AQ32MH5 1076 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 NKAIN1Q4KMZ8 207 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 TAF1BQ53T94 588 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 FBXO48Q5FWF7 155 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 TECRLQ5HYJ1 363 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 LGSNQ5TDP6 509 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 ARHGAP40Q5TG30 622 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 C1orf189Q5VU69 101 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 EMBQ6PCB8 327 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 GPR155Q7Z3F1 870 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 DTWD1Q8N5C7 304 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 CSNK1A1LQ8N752 337 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 MFSD9Q8NBP5 474 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 ZNF740Q8NDX6 193 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 UBTD2Q8WUN7 234 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 SLC5A11Q8WWX8 675 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 CAVIN3Q969G5 261 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 ESAMQ96AP7 390 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 KIAA1143Q96AT1 154 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 NDC1Q9BTX1 674 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 NLNQ9BYT8 704 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 CD244Q9BZW8 370 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 PELI2Q9HAT8 420 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 CUTCQ9NTM9 273 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 CD274Q9NZQ7 290 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 PSMC3IPQ9P2W1 217 aaPredicted RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 KCND3Q9UK17 655 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 RUVBL1Q9Y265 456 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms