RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PUS3Q9BZE2 481 aaKnown RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 OR2B2Q9GZK3 357 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 SHARPINQ9H0F6 387 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 TLE6Q9H808 572 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 TRPV4Q9HBA0 871 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 THEGQ9P2T0 379 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 DNAJB9Q9UBS3 223 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 GTF3C4Q9UKN8 822 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 STUB1Q9UNE7 303 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 SNX7Q9UNH6 387 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 RIPK3Q9Y572 518 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 TRAV34A0A0B4J273 112 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 C2orf81A6NN90 581 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 C2CD4DB7Z1M9 353 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 SLC30A4O14863 429 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 WDR46O15213 610 aaKnown RBP2.57□□□□□ -2
SCFD1-218ENST00000556256 SLC7A4O43246 635 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 NXPH2O95156 264 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 GSRP00390 522 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 GPIP06744 558 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 CASTP20810 708 aaKnown RBP2.57□□□□□ -2
SCFD1-218ENST00000556256 CRKLP46109 303 aaKnown RBP2.57□□□□□ -2
SCFD1-218ENST00000556256 RGS7P49802 495 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 MFAP3P55082 362 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 GSDMDP57764 484 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 KLC1Q07866 573 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 HERC3Q15034 1050 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 E2F5Q15329 346 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 TAZQ16635 292 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 PTGISQ16647 500 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 CDO1Q16878 200 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 LACTB2Q53H82 288 aaPredicted RBP2.57□□□□□ -2
SCFD1-218ENST00000556256 C1QTNF12Q5T7M4 302 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 WLSQ5T9L3 541 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 SHEQ5VZ18 495 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 TXNRD3NBQ6F5E7 133 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 MOXD1Q6UVY6 613 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 PET117Q6UWS5 81 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 ENPP7Q6UWV6 458 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 RTN4RL2Q86UN3 420 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 PIGZQ86VD9 579 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 DNAJC22Q8N4W6 341 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 OR4K1Q8NGD4 311 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 GOT1L1Q8NHS2 421 aaPredicted RBP2.57□□□□□ -2
SCFD1-218ENST00000556256 SUSD6Q92537 303 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 NSMAFQ92636 917 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 PROX1Q92786 737 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 P2RX5Q93086 422 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 THOC1Q96FV9 657 aaKnown RBP2.57□□□□□ -2
SCFD1-218ENST00000556256 MAP3K3Q99759 626 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 FERMT1Q9BQL6 677 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 FUCA2Q9BTY2 467 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 MLPHQ9BV36 600 aaPredicted RBP2.57□□□□□ -2
SCFD1-218ENST00000556256 WWTR1Q9GZV5 400 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 MIS12Q9H081 205 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 CPVLQ9H3G5 476 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 ZWILCHQ9H900 591 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 GSN-AS1Q9NRJ2 163 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 POMT1Q9Y6A1 747 aa2.57□□□□□ -2
SCFD1-218ENST00000556256 ANKRD61A6NGH8 418 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 MSGN1A6NI15 193 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 IDH3BO43837 385 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 DFFBO76075 338 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 BAG3O95817 575 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 CDH3P22223 829 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 HSD17B3P37058 310 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 PRKCIP41743 596 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 MAGEA11P43364 429 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 MTCP1P56278 107 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 GSCP56915 257 aaPredicted RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 HUNKP57058 714 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 TNK1Q13470 666 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 TAF13Q15543 124 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 PHKG1Q16816 387 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 TWISTNBQ3B726 338 aaPredicted RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 HIGD2BQ4VC39 106 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 SLC25A53Q5H9E4 307 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 SLC35D3Q5M8T2 416 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 OR4A47Q6IF82 309 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 TMEM182Q6ZP80 229 aaPredicted RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 Q6ZRP5 223 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 KCNMB4Q86W47 210 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 LGI2Q8N0V4 545 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 EID3Q8N140 333 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 NDUFAF2Q8N183 169 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 RYBPQ8N488 228 aaPredicted RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 MARVELD2Q8N4S9 558 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 HEXDCQ8WVB3 486 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 KCNE4Q8WWG9 221 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 ST6GALNAC6Q969X2 333 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 USP28Q96RU2 1077 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 CITED2Q99967 270 aaPredicted RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 THUMPD3Q9BV44 507 aaKnown RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 XAB2Q9HCS7 855 aaKnown RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 FAM207AQ9NSI2 230 aaPredicted RBP2.56□□□□□ -2
SCFD1-218ENST00000556256 MRGBPQ9NV56 204 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 P4HTMQ9NXG6 502 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 TXNDC16Q9P2K2 825 aa2.56□□□□□ -2
SCFD1-218ENST00000556256 TRBV5-5A0A0J9YX44 114 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms