RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 KCTD21Q4G0X4 260 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF805Q5CZA5 627 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 MAMDC4Q6UXC1 1216 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PSD4Q8NDX1 1056 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 OR52E4Q8NGH9 312 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CEP76Q8TAP6 659 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 DAZLQ92904 295 aaKnown RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PWWP2AQ96N64 755 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CD244Q9BZW8 370 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 MTMR10Q9NXD2 777 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 EURLQ9NYK6 297 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 MCM8Q9UJA3 840 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 HSPE1-MOB4S4R3N1 261 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 MTMR11A4FU01 709 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 L7N2F9 121 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 PEX10O60683 326 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 SCGNO76038 276 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 KDM4BO94953 1096 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 OXSR1O95747 527 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 HK1P19367 917 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 GRK5P34947 590 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 WASP42768 502 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 CLCNKAP51800 687 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 VAMP2P63027 116 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 SCAPQ12770 1279 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 RPA4Q13156 261 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF227Q86WZ6 799 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 FAM129CQ86XR2 697 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 NRROSQ86YC3 692 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ERI1Q8IV48 349 aaKnown RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 PYROXD2Q8N2H3 581 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 GNPDA2Q8TDQ7 276 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 C10orf82Q8WW14 230 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 PYURFQ96I23 114 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 BHLHE41Q9C0J9 482 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 RNF121Q9H920 327 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 PIGVQ9NUD9 493 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF536O15090 1300 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 SH3D21A4FU49 640 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 FAM172BPA6NC97 362 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 C9IYK1 514 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 H0YAE9 185 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 PLOD2O00469 737 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 IL3P08700 152 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 CASP6P55212 293 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 UBAP2Q5T6F2 1119 aaKnown RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ARHGAP40Q5TG30 622 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ERN2Q76MJ5 926 aaKnown RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 GPAT4Q86UL3 456 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 INO80EQ8NBZ0 244 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF420Q8TAQ5 688 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 COQ8BQ96D53 544 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 OR2M4Q96R27 311 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 CADM1Q9BY67 442 aaKnown RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 UTS2RQ9UKP6 389 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 TEX264Q9Y6I9 313 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 LMO7Q8WWI1 1683 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 TRBC2A0A5B9 178 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 EFCAB9A8MZ26 197 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 MUSKO15146 869 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 CD48P09326 243 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 RPS24P62847 133 aaKnown RBP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 CYP4F8P98187 520 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 PLGLB1Q02325 96 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ARFRP1Q13795 201 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 SLC14A2Q15849 920 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 TIGD6Q17RP2 521 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 KIAA1161Q6NSJ0 714 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 HACD2Q6Y1H2 254 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 FRMD7Q6ZUT3 714 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 GALNT5Q7Z7M9 940 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 CILP2Q8IUL8 1156 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 RASGRP3Q8IV61 690 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 FAM46DQ8NEK8 389 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 AKAP1Q92667 903 aaKnown RBP eCLIP10.41□□□□□ -0.74
ACTN1-216ENST00000556083 WDR92Q96MX6 357 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 OR52B2Q96RD2 323 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 AIFM2Q9BRQ8 373 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 HDHD5Q9BXW7 423 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 ITPAQ9BY32 194 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 RNF19AQ9NV58 838 aa10.41□□□□□ -0.74
ACTN1-216ENST00000556083 M0R2N6 131 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ACOX3O15254 700 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 IFNA7P01567 189 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 MT-ND5P03915 603 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ENGP17813 658 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 AHCYP23526 432 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 GPR143P51810 404 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 OC90Q02509 493 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-216ENST00000556083 NIPAL4Q0D2K0 466 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ELAVL3Q14576 367 aaKnown RBP10.4□□□□□ -0.74
ACTN1-216ENST00000556083 SLC36A4Q6YBV0 504 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 LYSMD3Q7Z3D4 306 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 PROKR2Q8NFJ6 384 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 OR4K14Q8NGD5 310 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 IGSF21Q96ID5 467 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 PDE7BQ9NP56 450 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 CYTH4Q9UIA0 394 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 SCP2D1Q9UJQ7 156 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 FZD1Q9UP38 647 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms