RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RASGEF1BQ0VAM2 473 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 HSPB3Q12988 150 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 DUSP5Q16690 384 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 TMEM266Q2M3C6 531 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 CBWD6Q4V339 395 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 CBWD3Q5JTY5 395 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 UTF1Q5T230 341 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 HIPK1Q86Z02 1210 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 LINC00346Q8IVM7 164 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 SLC22A15Q8IZD6 547 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 TCEANCQ8N8B7 351 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 LRTM2Q8N967 370 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 CFAP61Q8NHU2 1237 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 ITLN1Q8WWA0 313 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 ROBO4Q8WZ75 1007 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 DGAT2Q96PD7 388 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 TAAR6Q96RI8 345 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 SEPHS2Q99611 448 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 MAK16Q9BXY0 300 aaKnown RBP2.04□□□□□ -2.08
SRP54-207ENST00000555535 SLC39A8Q9C0K1 460 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 HACD3Q9P035 362 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 PILRAQ9UKJ1 303 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 MRPS18CQ9Y3D5 142 aaKnown RBP2.04□□□□□ -2.08
SRP54-207ENST00000555535 RPS6KL1Q9Y6S9 549 aa2.04□□□□□ -2.08
SRP54-207ENST00000555535 F8VVB4 439 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 F8VWA3 439 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 ZNF749O43361 778 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 TXNL1O43396 289 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 DOK2O60496 412 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 CYTIPO60759 359 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 GJB3O75712 270 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 PFKFB1P16118 471 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 ELK3P41970 407 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 ABCE1P61221 599 aaKnown RBP2.03□□□□□ -2.08
SRP54-207ENST00000555535 PPIAP62937 165 aaKnown RBP2.03□□□□□ -2.08
SRP54-207ENST00000555535 SRPXP78539 464 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 OPCMLQ14982 345 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 SZRD1Q7Z422 152 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 ADGRD2Q7Z7M1 963 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 RPAINQ86UA6 219 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 CARM1Q86X55 608 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 RCOR2Q8IZ40 523 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 MCUQ8NE86 351 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 CHURC1Q8WUH1 139 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 ZNF622Q969S3 477 aaKnown RBP eCLIP2.03□□□□□ -2.085e-8■□□□□ 10.1
SRP54-207ENST00000555535 FAM120BQ96EK7 910 aaKnown RBP2.03□□□□□ -2.08
SRP54-207ENST00000555535 RADILQ96JH8 1075 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 NEDD4LQ96PU5 975 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 HNRNPABQ99729 332 aaKnown RBP2.03□□□□□ -2.08
SRP54-207ENST00000555535 APOL2Q9BQE5 337 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 LRRCC1Q9C099 1032 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 ADAM22Q9P0K1 906 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 IL17CQ9P0M4 197 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 STK26Q9P289 416 aa2.03□□□□□ -2.08
SRP54-207ENST00000555535 LOC100509620A0A075B734 347 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 TCP11X1B4DZS4 312 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 RNF103O00237 685 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 PTGESO14684 152 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 HDAC3O15379 428 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 SAP30O75446 220 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 MT-ND1P03886 318 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 LHX1P48742 406 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 MC1RQ01726 317 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 CREB5Q02930 508 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 CUL3Q13618 768 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 SNAPC1Q16533 368 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 FAM106AQ4KMX7 169 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 LINC00242Q5T6M2 205 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 ATP1A1-AS1Q5TC04 95 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 SMC5Q8IY18 1101 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 C17orf53Q8N3J3 647 aaPredicted RBP2.02□□□□□ -2.09
SRP54-207ENST00000555535 AVL9Q8NBF6 648 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 NOA1Q8NC60 698 aaKnown RBP2.02□□□□□ -2.09
SRP54-207ENST00000555535 RPLP0P6Q8NHW5 317 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 FLVCR1-AS1Q8TAF5 88 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 HDAC2Q92769 488 aaKnown RBP2.02□□□□□ -2.09
SRP54-207ENST00000555535 PHYHIPLQ96FC7 376 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 CTRCQ99895 268 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 PRRG4Q9BZD6 226 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 CDH20Q9HBT6 801 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 RAVER2Q9HCJ3 691 aaKnown RBP2.02□□□□□ -2.09
SRP54-207ENST00000555535 TBC1D13Q9NVG8 400 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 GDE1Q9NZC3 331 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 Q9UF83 564 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 IL17BQ9UHF5 180 aa2.02□□□□□ -2.09
SRP54-207ENST00000555535 A0A087WZ39 114 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 TRIM77I1YAP6 450 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 MAGEB2O15479 319 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 TPD52L2O43399 206 aaKnown RBP2.01□□□□□ -2.09
SRP54-207ENST00000555535 ENTPD3O75355 529 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 ACSL3O95573 720 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 SEMA4FO95754 770 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 RPLP0P05388 317 aaKnown RBP2.01□□□□□ -2.09
SRP54-207ENST00000555535 CSN3P07498 182 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 LINGO3P0C6S8 592 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 CYP11B2P19099 503 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 CD22P20273 847 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 PKLRP30613 574 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 ZNF75DP51815 510 aa2.01□□□□□ -2.09
SRP54-207ENST00000555535 STAT2P52630 851 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms