RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RBFAQ8N0V3 343 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 MMP21Q8N119 569 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 NECTIN3Q9NQS3 549 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 SNTG1Q9NSN8 517 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 SAMD4AQ9UPU9 718 aaKnown RBP16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 VPS9D1Q9Y2B5 631 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 AGAP5A6NIR3 686 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 PCDH17O14917 1159 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 KRT75O95678 551 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 KRT8P05787 483 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 RETP07949 1114 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 PREPP48147 710 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 GZMMP51124 257 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 NRARPQ7Z6K4 114 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 ARL14EPQ8N8R7 260 aaPredicted RBP16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 SLC38A4Q969I6 547 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 VMP1Q96GC9 406 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 SAMD11Q96NU1 681 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 TSPAN18Q96SJ8 248 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 KCNH6Q9H252 994 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 ABCB9Q9NP78 766 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 EYSQ5T1H1 3165 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 KIAA0513O60268 411 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 GUCY1B2O75343 617 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 TRBC1P01850 177 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 FPR1P21462 350 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 SOAT1P35610 550 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 ZNF157P51786 506 aaPredicted RBP16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 MGAT3Q09327 533 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 GAB1Q13480 694 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 ZZZ3Q8IYH5 903 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 ZNF366Q8N895 744 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 PKP4Q99569 1192 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 MTG2Q9H4K7 406 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 CHD5Q8TDI0 1954 aa16.49■□□□□ 0.23
PPP4R3A-208ENST00000555462 ERN1O75460 977 aaKnown RBP16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 CCNDBP1O95273 360 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 HIST1H2AGP0C0S8 130 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 HIST1H2ADP20671 130 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 HMGCLP35914 325 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 NRIP1P48552 1158 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 SLC11A1P49279 550 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 CYP4F8P98187 520 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 ABHD18Q0P651 414 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 IRF3Q14653 427 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 ACOX1Q15067 660 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 KIAA1841Q6NSI8 718 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 C1orf52Q8N6N3 182 aaKnown RBP16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 HIST1H2AHQ96KK5 128 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 HIST1H2AJQ99878 128 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 H2AFJQ9BTM1 129 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 NDRG4Q9ULP0 352 aaKnown RBP16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 OARD1Q9Y530 152 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 CLDN8P56748 225 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 BCL2L1Q07817 233 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 DSC3Q14574 896 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 EXOC3L2Q2M3D2 409 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 DEPDC1Q5TB30 811 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 ATG9BQ674R7 924 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 NCEH1Q6PIU2 408 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 PAQR6Q6TCH4 344 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 ABI3BPQ7Z7G0 1075 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 ZNF605Q86T29 641 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 SVOPQ8N4V2 548 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 CIDECQ96AQ7 238 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 CLEC2DQ9UHP7 191 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 RAB23Q9ULC3 237 aa16.48■□□□□ 0.23
PPP4R3A-208ENST00000555462 TRBV5-3A0A0A0MS03 114 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 M0QX08 132 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 SUV39H1O43463 412 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 CLDN11O75508 207 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 CASP3P42574 277 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 CRYBA2P53672 197 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 NAE1Q13564 534 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 HECTD3Q5T447 861 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 UBASH3BQ8TF42 649 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 BCL7CQ8WUZ0 217 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 ACAT2Q9BWD1 397 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 TM9SF3Q9HD45 589 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 DNAJC27Q9NZQ0 273 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 LHX3Q9UBR4 397 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 OSGIN1Q9UJX0 560 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 CNTRLQ7Z7A1 2325 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 FAM220BPB1ANY3 271 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 IDH3BO43837 385 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 FLT3LGP49771 235 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 CAV3P56539 151 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 ACSM2AQ08AH3 577 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 SPANXN2Q5MJ10 180 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 ACSM2BQ68CK6 577 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 USP50Q70EL3 339 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 WDR53Q7Z5U6 358 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 GLCCI1Q86VQ1 547 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 DEPDC4Q8N2C3 294 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 STK40Q8N2I9 435 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 AADATQ8N5Z0 425 aa16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 WDR36Q8NI36 951 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-208ENST00000555462 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms