RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 COG8Q96MW5 612 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 ING2Q9H160 280 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 TUBB1Q9H4B7 451 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 RPF2Q9H7B2 306 aaKnown RBP10.77□□□□□ -0.69
SRP54-205ENST00000554803 NANOGQ9H9S0 305 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 POLR1BQ9H9Y6 1135 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 FBRSQ9HAH7 460 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 THSD1Q9NS62 852 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 C3orf18Q9UK00 162 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 ERVW-1Q9UQF0 538 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 EIF3LQ9Y262 564 aaKnown RBP10.77□□□□□ -0.69
SRP54-205ENST00000554803 CRYL1Q9Y2S2 319 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 SH3GLB1Q9Y371 365 aa10.77□□□□□ -0.69
SRP54-205ENST00000554803 CXorf51AA0A1B0GTR3 108 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 K7ERQ8 282 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 EIF3FO00303 357 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 MUSKO15146 869 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 RECQL5O94762 991 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 KCNH1O95259 989 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 MT-CO1P00395 513 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 SLC4A1P02730 911 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 WNT1P04628 370 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 IGHV4-34P06331 123 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 CCDC159P0C7I6 412 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 LINC00032P0C843 101 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 MYF5P13349 255 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 GGT1P19440 569 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 RPS3P23396 243 aaKnown RBP eCLIP10.76□□□□□ -0.698e-6■■□□□ 12.6
SRP54-205ENST00000554803 RGRP47804 291 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 STK19P49842 368 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 RAD23AP54725 363 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 CDH13P55290 713 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 MAXP61244 160 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 BNIP3Q12983 259 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 CAMK2GQ13555 558 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 RBBP7Q16576 425 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 C4orf17Q53FE4 359 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 IGF2-ASQ6U949 168 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 CCDC81Q6ZN84 652 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 KCTD8Q6ZWB6 473 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 KANSL1Q7Z3B3 1105 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 GLT6D1Q7Z4J2 308 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 ADIPOR2Q86V24 386 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 PIM3Q86V86 326 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 EID3Q8N140 333 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 RYBPQ8N488 228 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.76□□□□□ -0.69
SRP54-205ENST00000554803 SETD9Q8NE22 299 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 UBTD2Q8WUN7 234 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 S100ZQ8WXG8 99 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 SORCS1Q8WY21 1168 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 ZNF566Q969W8 418 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 SLC6A18Q96N87 628 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 CGREF1Q99674 301 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 CINPQ9BW66 212 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 CHID1Q9BWS9 393 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 SLC29A3Q9BZD2 475 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 SGK2Q9HBY8 427 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 ACSS2Q9NR19 701 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 IRAK4Q9NWZ3 460 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 IFT80Q9P2H3 777 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 UBA2Q9UBT2 640 aaPredicted RBP10.76□□□□□ -0.69
SRP54-205ENST00000554803 PSME2Q9UL46 239 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 PCDHGB1Q9Y5G3 927 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 ORC6Q9Y5N6 252 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 RP1P56715 2156 aa10.76□□□□□ -0.69
SRP54-205ENST00000554803 FBN2P35556 2912 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 A0A1W2PPC4 97 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 UBA6A0AVT1 1052 aaPredicted RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 CLEC18AA5D8T8 446 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 BTN3A1O00481 513 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 RAD51BO15315 384 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 INSIG1O15503 277 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 SMAD6O43541 496 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 RGS14O43566 566 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 ERN1O75460 977 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 BCL10O95999 233 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 ALPLP05186 524 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 F7P08709 466 aaPredicted RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 ITIH1P19827 911 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 VARSP26640 1264 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 MAP4P27816 1152 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 RYKP34925 604 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 MAGEA8P43361 318 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 ZFP36L2P47974 494 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 RXRGP48443 463 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 SERPINB10P48595 397 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CD97P48960 835 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 ARRB1P49407 418 aaPredicted RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 CXCR4P61073 352 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 PHEXP78562 749 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 ABRQ12979 859 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 TMED1Q13445 227 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 IHHQ14623 411 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 TSNQ15631 228 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 PROX2Q3B8N5 592 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 LINC00303Q3SY05 128 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CDCP2Q5VXM1 449 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 ATG9BQ674R7 924 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms