RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 BUB3O43684 328 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 OR10H2O60403 315 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TBCAO75347 108 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 C22orf31O95567 290 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HSPA4LO95757 839 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PDGFBP01127 241 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ATP1A1P05023 1023 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 F7P08709 466 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 QDPRP09417 244 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ACP2P11117 423 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 AMD1P17707 334 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ACHEP22303 614 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 VCPP55072 806 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HNRNPKP61978 463 aaKnown RBP eCLIP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MBTD1Q05BQ5 628 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 RBPJQ06330 500 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MFAP5Q13361 173 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 VWC2Q2TAL6 325 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 KRBOX4Q5JUW0 171 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SPECC1Q5M775 1068 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ARMC3Q5W041 872 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PLA2G4FQ68DD2 849 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 LINGO4Q6UY18 593 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ZBTB49Q6ZSB9 765 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 C9orf139Q6ZV77 190 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DET1Q7L5Y6 550 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 VSIG1Q86XK7 387 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MAML2Q8IZL2 1156 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CRYBG2Q8N1P7 616 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 RFLNBQ8N5W9 214 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CPSF7Q8N684 471 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SLC4A11Q8NBS3 891 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CAMKVQ8NCB2 501 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 Q8NFD4 153 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DMBX1Q8NFW5 382 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 RNF128Q8TEB7 428 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TEKT1Q969V4 418 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SCRN2Q96FV2 425 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SGK494Q96LW2 274 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF583Q96ND8 569 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SLC25A23Q9BV35 468 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ST6GALNAC4Q9H4F1 302 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 UPF2Q9HAU5 1272 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 APOBEC3GQ9HC16 384 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TCF7L2Q9NQB0 619 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PFDN4Q9NQP4 134 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 OLFML3Q9NRN5 406 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CWC25Q9NXE8 425 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DONSONQ9NYP3 566 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PTTG2Q9NZH5 202 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DBF4Q9UBU7 674 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ANAPC5Q9UJX4 755 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 FAF1Q9UNN5 650 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CSMD2Q7Z408 3487 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 RALGAPA1Q6GYQ0 2036 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 A0A1W2PPQ1 181 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 A0A1W2PRB8 838 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 NTN3O00634 580 aaPredicted RBP1.41□□□□□ -2.18
PRPF39-208ENST00000554785 PTGESO14684 152 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 DCXO43602 365 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 SYNCRIPO60506 623 aaKnown RBP1.41□□□□□ -2.18
PRPF39-208ENST00000554785 RECQL5O94762 991 aaPredicted RBP1.41□□□□□ -2.18
PRPF39-208ENST00000554785 IGLV2-11P01706 119 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 PGK2P07205 417 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 UMODP07911 640 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 RAB40ALP0C0E4 278 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 OR52Z1P0C646 297 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 FDPSP14324 419 aaKnown RBP1.41□□□□□ -2.18
PRPF39-208ENST00000554785 MSH3P20585 1137 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 EEF1B2P24534 225 aaKnown RBP1.41□□□□□ -2.18
PRPF39-208ENST00000554785 PTAFRP25105 342 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 EPHA2P29317 976 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 SLC6A6P31641 620 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 CCR10P46092 362 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 THOP1P52888 689 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 LIMK1P53667 647 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 RIPK4P57078 832 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 ACSM1Q08AH1 577 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 HYAL4Q2M3T9 481 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF672Q499Z4 452 aaPredicted RBP1.41□□□□□ -2.18
PRPF39-208ENST00000554785 ACCSLQ4AC99 568 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 LCE1FQ5T754 118 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 FBXL22Q6P050 247 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 IL27RAQ6UWB1 636 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 GDPD4Q6W3E5 623 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 ERN2Q76MJ5 926 aaKnown RBP1.41□□□□□ -2.18
PRPF39-208ENST00000554785 KRT77Q7Z794 578 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 TMPRSS11BQ86T26 416 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 NFE4Q86UQ8 179 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 MFN1Q8IWA4 741 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 CFAP206Q8IYR0 622 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 KBTBD3Q8NAB2 608 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 TRPV1Q8NER1 839 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 KIF18AQ8NI77 898 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 ROBO4Q8WZ75 1007 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 SIPA1Q96FS4 1042 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 SPATA17Q96L03 361 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 FER1L6-AS2Q96M78 137 aa1.41□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF558Q96NG5 402 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms