RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 LRRC58Q96CX6 371 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ATXN7L3BQ96GX2 97 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ZC3H10Q96K80 434 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 MARK4Q96L34 752 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 COG8Q96MW5 612 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CCDC115Q96NT0 180 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PPP1R10Q96QC0 940 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 OMDQ99983 421 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 KCTD14Q9BQ13 255 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 MED10Q9BTT4 135 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 EDEM2Q9BV94 578 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 UGT2B28Q9BY64 529 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 BRINP2Q9C0B6 783 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PAIP1Q9H074 479 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ZCWPW1Q9H0M4 648 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SLC25A51Q9H1U9 297 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 POFUT1Q9H488 388 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 RAD21L1Q9H4I0 556 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 GSTO2Q9H4Y5 243 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 POLR1BQ9H9Y6 1135 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CSNK1G1Q9HCP0 422 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CCNB1IP1Q9NPC3 277 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 RXFP3Q9NSD7 469 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PIGVQ9NUD9 493 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 OSER1Q9NX31 292 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 OBP2AQ9NY56 170 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 USE1Q9NZ43 259 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SLC17A6Q9P2U8 582 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 AFF4Q9UHB7 1163 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PACSIN3Q9UKS6 424 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ERGIC3Q9Y282 383 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 VWA7Q9Y334 891 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SNX5Q9Y5X3 404 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 AP1M2Q9Y6Q5 423 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 HSPE1-MOB4S4R3N1 261 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF638Q14966 1978 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 DOCK6Q96HP0 2047 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 F5P12259 2224 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 COL4A2P08572 1712 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 A0A0G2JNJ9 132 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SMIM28A0A1B0GU29 152 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 FAM234BA2RU67 622 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 FUOMA2VDF0 154 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ISPDA4D126 451 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CCDC154A6NI56 674 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CLDN25C9JDP6 229 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 NME4O00746 187 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SOCS2O14508 198 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ARPC2O15144 300 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ATP6V1G1O75348 118 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 MOSPD3O75425 235 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CRCPO75575 148 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TIPRLO75663 272 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SULT1C4O75897 302 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SOAT2O75908 522 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RHOBTB1O94844 696 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SEC24AO95486 1093 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CNOT4O95628 575 aaKnown RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 EPOP01588 193 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PRR35P0CG20 571 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RAP2AP10114 183 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ITIH1P19827 911 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 HLA-DPA1P20036 260 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TCN1P20061 433 aaPredicted RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 MSH3P20585 1137 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ATP6V1B2P21281 511 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 FDXRP22570 491 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 JAK1P23458 1154 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SLC6A2P23975 617 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 GABRB3P28472 473 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CCR1P32246 355 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RPL9P32969 192 aaKnown RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 BRCC3P46736 316 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ENTPD1P49961 510 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 HNRNPFP52597 415 aaKnown RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SLC5A3P53794 718 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ARPP19P56211 112 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 LILRA4P59901 499 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CSNK2BP67870 215 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PRAMEP78395 509 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ADARB1P78563 741 aaKnown RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RELAQ04206 551 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ACVR1Q04771 509 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TWF1Q12792 350 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 MAD2L1Q13257 205 aaPredicted RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PLD1Q13393 1074 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 DAG1Q14118 895 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CSHL1Q14406 222 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ACOX1Q15067 660 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PON2Q15165 354 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TEAD2Q15562 447 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CYP51A1Q16850 503 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CTXN3Q4LDR2 81 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CYBRD1Q53TN4 286 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 HECTD2Q5U5R9 776 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 AFMIDQ63HM1 303 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TMEM198Q66K66 360 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF280DQ6N043 979 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 METTL2BQ6P1Q9 378 aaKnown RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TUBA3EQ6PEY2 450 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms