RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CXorf40BQ96DE9 158 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CAMK1GQ96NX5 476 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF317Q96PQ6 595 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ELAC2Q9BQ52 826 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 HAUS8Q9BT25 410 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 NTMT1Q9BV86 223 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ZDHHC5Q9C0B5 715 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TMEM168Q9H0V1 697 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 FGF22Q9HCT0 170 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 MRPL40Q9NQ50 206 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 GPR27Q9NS67 375 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 DNAJC11Q9NVH1 559 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 DNAJC28Q9NX36 388 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 UTP6Q9NYH9 597 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 GPRC5BQ9NZH0 403 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 APOBEC3BQ9UH17 382 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 KCNK6Q9Y257 313 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CA5BQ9Y2D0 317 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TDRKHQ9Y2W6 561 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 PRKAB1Q9Y478 270 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 KCNE2Q9Y6J6 123 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CSNK1G3Q9Y6M4 447 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 EML5Q05BV3 1969 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TECTAO75443 2155 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CHD9Q3L8U1 2897 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TRANK1O15050 2925 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 GOLGA8QA0A0J9YX86 632 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 FAM221BA6H8Z2 402 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 GOLGA8OA6NCC3 632 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ARHGEF33A8MVX0 844 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 GOLGA8NF8WBI6 632 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 MYO1CO00159 1063 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 AQP9O43315 295 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 SNX3O60493 162 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 UGDHO60701 494 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 VPS4BO75351 444 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 WDR47O94967 919 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 CCNDBP1O95273 360 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 FKBP9O95302 570 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ESRRBO95718 433 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ENO1P06733 434 aaKnown RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 RPS17P08708 135 aaKnown RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 CELA3BP08861 270 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 SP9P0CG40 484 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ALPPL2P10696 532 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 UROSP10746 265 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 MTHFD1P11586 935 aaKnown RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 TDGF1P13385 188 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 HGFP14210 728 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 GNAZP19086 355 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 DRD4P21917 467 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 BCKDHBP21953 392 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 HMOX2P30519 316 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 SHMT2P34897 504 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ARL1P40616 181 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 HNF4AP41235 474 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 RXRGP48443 463 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 GIPRP48546 466 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 HSPA7P48741 367 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 CSNK1EP49674 416 aaKnown RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ARFIP2P53365 341 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 SEC24CP53992 1094 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 PNLIPRP1P54315 467 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 NXPH1P58417 271 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 IRX1P78414 480 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 PHEXP78562 749 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 OCRLQ01968 901 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 DMWDQ09019 674 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 NAE1Q13564 534 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 NAA25Q14CX7 972 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ANGPT1Q15389 498 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 TERF2Q15554 542 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 RPE65Q16518 533 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 RBBP7Q16576 425 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 PHKG1Q16816 387 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 PPP1R3AQ16821 1122 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 PTCHD3Q3KNS1 767 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ARL13AQ5H913 290 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 C10orf62Q5T681 223 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 THEMIS2Q5TEJ8 643 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ARMC6Q6NXE6 501 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 KLHL35Q6PF15 583 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 IYDQ6PHW0 289 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 VHLLQ6RSH7 139 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 LCTLQ6UWM7 567 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 FAM83HQ6ZRV2 1179 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ZCCHC23Q6ZST2 131 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 FRMD7Q6ZUT3 714 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 FAM47EQ6ZV65 393 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 SPATA21Q7Z572 469 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 PIGWQ7Z7B1 504 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 CUZD1Q86UP6 607 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 THOC6Q86W42 341 aaKnown RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 KLHDC8AQ8IYD2 350 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 MAML2Q8IZL2 1156 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-202ENST00000553619 CACNA2D3Q8IZS8 1091 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 TBC1D19Q8N5T2 526 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 TEX9Q8N6V9 391 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 SNX31Q8N9S9 440 aa4.84□□□□□ -1.63
VTI1B-202ENST00000553619 ZBTB44Q8NCP5 570 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms