RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TAB3Q8N5C8 712 aaPredicted RBP10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 TMEM178AQ8NBL3 297 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 ELMO1Q92556 727 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 HAUS1Q96CS2 278 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 C18orf12Q96KH6 178 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 NAP1L3Q99457 506 aaPredicted RBP10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 FAM118BQ9BPY3 351 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 UTP23Q9BRU9 249 aaKnown RBP10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 LRRC1Q9BTT6 524 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 FSD1LQ9BXM9 530 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 ANKZF1Q9H8Y5 726 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 TRHDEQ9UKU6 1024 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 CDC14AQ9UNH5 594 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 PLEKHA6Q9Y2H5 1048 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 L3MBTL1Q9Y468 752 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 FAM169AQ9Y6X4 670 aa10.73□□□□□ -0.69
SUPT16H-202ENST00000552829 HIVEP2P31629 2446 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 hCG_1818297A0A087WSY0 165 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 A0A0J9YVX5 310 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 OR2A25A4D2G3 310 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 CCDC188H7C350 402 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 DYNC1I1O14576 645 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 PRPF4O43172 522 aaKnown RBP eCLIP10.72□□□□□ -0.692e-6■■■■□ 21.6
SUPT16H-202ENST00000552829 RAD51CO43502 376 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 FOXS1O43638 330 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 PHF2O75151 1096 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 FTH1P02794 183 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 INHBBP09529 407 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 PSMA3P25788 255 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 PTGS2P35354 604 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 CETN2P41208 172 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 MEOX1P50221 254 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 ST13P50502 369 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 GEMP55040 296 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 DYNLT1P63172 113 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 FASTKQ14296 549 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 SIX1Q15475 284 aaPredicted RBP10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 MEP1AQ16819 746 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 EMC4Q5J8M3 183 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 PACS1Q6VY07 963 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 CAMKMTQ7Z624 323 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 CD163Q86VB7 1156 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 VRK3Q8IV63 474 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 RCOR2Q8IZ40 523 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 SLC22A15Q8IZD6 547 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 WFDC11Q8NEX6 87 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 C1orf54Q8WWF1 131 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 RND1Q92730 232 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 DNAJC1Q96KC8 554 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 APOL2Q9BQE5 337 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 POLDIP3Q9BY77 421 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 OSBPL8Q9BZF1 889 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 GBA3Q9H227 469 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 SYNPO2LQ9H987 977 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 ARNT2Q9HBZ2 717 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 ANKRD10Q9NXR5 420 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 RSPH14Q9UHP6 348 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 TTC7AQ9ULT0 858 aaPredicted RBP10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 R3HDM2Q9Y2K5 976 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 SCN3AQ9NY46 2000 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 ARID1AO14497 2285 aa10.72□□□□□ -0.69
SUPT16H-202ENST00000552829 IGHV3-20A0A0C4DH32 117 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 FAM237BA0A1B0GVD1 139 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 H0YGG7 62 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 QSOX1O00391 747 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 CDK2AP1O14519 115 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 GPC4O75487 556 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 ANXA9O76027 345 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 SEC24DO94855 1032 aaPredicted RBP10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 HEXAP06865 529 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 CYC1P08574 325 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 C8orf89P0DMQ9 161 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 ZNF24P17028 368 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 HOXC12P31275 282 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 ARF3P61204 181 aaPredicted RBP10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 SNX1Q13596 522 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 ITIH4Q14624 930 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 BTBD16Q32M84 506 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 TAS2R42Q7RTR8 314 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 CPEB2Q7Z5Q1 589 aaKnown RBP10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 TAX1BP1Q86VP1 789 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 ZNF227Q86WZ6 799 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 DCUN1D3Q8IWE4 304 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 CLYBLQ8N0X4 340 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 RPRMLQ8N4K4 120 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 CPSF7Q8N684 471 aaKnown RBP10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 PRELID2Q8N945 189 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 FAM98AQ8NCA5 519 aaKnown RBP10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 OR2A1Q8NGT9 310 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 HMGCLL1Q8TB92 370 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 ATG4AQ8WYN0 398 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 SEC16BQ96JE7 1060 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 CYTH2Q99418 400 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 VN1R1Q9GZP7 353 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 RASSF1Q9NS23 344 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 NLE1Q9NVX2 485 aaPredicted RBP10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 LRFN1Q9P244 771 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 CIDEBQ9UHD4 219 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 GNPTGQ9UJJ9 305 aa10.71□□□□□ -0.69
SUPT16H-202ENST00000552829 A0A1B0GTH9 108 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms