RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 DDX49Q9Y6V7 483 aaKnown RBP4.3□□□□□ -1.72
RAB3IP-214ENST00000550847 CKAP5Q14008 2032 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 HYKKA2RU49 373 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 IFITM10A6NMD0 228 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 TMEM150CB9EJG8 249 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 PRSS46E5RG02 174 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 F8VVB4 439 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 F8VWA3 439 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 TIMM23O14925 209 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MAGEB3O15480 346 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 GPR137BO60478 399 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 NDUFS7O75251 213 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 ZNF821O75541 412 aaPredicted RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 RPS6KA5O75582 802 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 OR6A2O95222 327 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SMIM18P0DKX4 95 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 TOP1P11387 765 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 CORO1AP31146 461 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 PTGER3P43115 390 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 FMO5P49326 533 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 DHPSP49366 369 aaPredicted RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 METAP1P53582 386 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MTTPP55157 894 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 IRX4P78413 519 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 BEX3Q00994 111 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SPIBQ01892 262 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 BNC1Q01954 994 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SULT2A1Q06520 285 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 GK2Q14410 553 aaPredicted RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 CTF1Q16619 201 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 FSCBQ5H9T9 825 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 WBP2NLQ6ICG8 309 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 CAPRIN2Q6IMN6 1127 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 C11orf63Q6NUN7 778 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 C8orf82Q6P1X6 216 aaPredicted RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 CD164L2Q6UWJ8 174 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 PRSS57Q6UWY2 283 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 PLXDC2Q6UX71 529 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SIGLEC15Q6ZMC9 328 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SLC16A9Q7RTY1 509 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 GPR141Q7Z602 305 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 FAM114A1Q8IWE2 563 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 CHERPQ8IWX8 916 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 ZCCHC7Q8N3Z6 543 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 THAP8Q8NA92 274 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MIGA1Q8NAN2 632 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SIDT2Q8NBJ9 832 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MINDY2Q8NBR6 621 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 OR56B2PQ8NGI1 322 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 OR5R1Q8NH85 324 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 BRSK1Q8TDC3 778 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SLC44A1Q8WWI5 657 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 GGHQ92820 318 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 PCDHB18PQ96TA0 734 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MMTAG2Q9BU76 263 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 ZSCAN5AQ9BUG6 496 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 ZNF416Q9BWM5 594 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SIRPDQ9H106 197 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 ZDHHC6Q9H6R6 413 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 PALMDQ9NP74 551 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 RAB9BQ9NP90 201 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SMPD3Q9NY59 655 aaPredicted RBP4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MIS18AQ9NYP9 233 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 B3GAT1Q9P2W7 334 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 CLIP2Q9UDT6 1046 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 SNX6Q9UNH7 406 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 ENTPD4Q9Y227 616 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 WDR83OSQ9Y284 106 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 PAM16Q9Y3D7 125 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MFHAS1Q9Y4C4 1052 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 LOXL2Q9Y4K0 774 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 MAB21L2Q9Y586 359 aa4.29□□□□□ -1.72
RAB3IP-214ENST00000550847 NSD2O96028 1365 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 PCDH11YQ9BZA8 1340 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 MAGEB16A2A368 324 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 SLC15A5A6NIM6 579 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 NUDT21O43809 227 aaKnown RBP4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 LANCL1O43813 399 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 ATP6V1G1O75348 118 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 IRF2P14316 349 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 CPA3P15088 417 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 CYP2F1P24903 491 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 PTPN4P29074 926 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 OTX2P32243 289 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 HSPA1LP34931 641 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 NSFP46459 744 aaKnown RBP4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 SSTP61278 116 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 GABPB1Q06547 395 aaPredicted RBP4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 IL10RBQ08334 325 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 CTTNQ14247 550 aaKnown RBP4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 CA9Q16790 459 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 CFAP157Q5JU67 520 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 LYSMD4Q5XG99 296 aa4.28□□□□□ -1.72
RAB3IP-214ENST00000550847 RGMBQ6NW40 437 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms