RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 TOX3O15405 576 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 GP1BAP07359 652 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 SERPINA6P08185 405 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 CD1CP29017 333 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 NEK2P51955 445 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 MEF2AQ02078 507 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 TUBB3Q13509 450 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 CUL3Q13618 768 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 DDX39BQ13838 428 aaKnown RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 NR6A1Q15406 480 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 ZC3H12BQ5HYM0 836 aaKnown RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 SCIMPQ6UWF3 145 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 KMT5CQ86Y97 462 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 Q8N9G6 341 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 C19orf47Q8N9M1 422 aaKnown RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 ZNF740Q8NDX6 193 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 WDR48Q8TAF3 677 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 RHBDD1Q8TEB9 315 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 MTFMTQ96DP5 389 aaKnown RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 CMTM7Q96FZ5 175 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 TCTN2Q96GX1 697 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 CNDP2Q96KP4 475 aaKnown RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 C3orf30Q96M34 536 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 LRRC37BQ96QE4 947 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 MTERF1Q99551 399 aaKnown RBP16.67■□□□□ 0.26
LETMD1-220ENST00000549686 CCDC3Q9BQI4 270 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 CENPKQ9BS16 269 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 ACPTQ9BZG2 426 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 LRTM1Q9HBL6 345 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 C1orf109Q9NX04 203 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 SEMA5BQ9P283 1151 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 VPS29Q9UBQ0 182 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 FTSJ1Q9UET6 329 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 PCDHGA4Q9Y5G9 962 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 AP1M2Q9Y6Q5 423 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 ATP6AP2A0A1C7CYW4 349 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 MAGEB17A8MXT2 336 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 LSM1O15116 133 aaKnown RBP16.66■□□□□ 0.26
LETMD1-220ENST00000549686 UBDO15205 165 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 ATP6AP2O75787 350 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 SEMA3DO95025 777 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 ACPPP15309 386 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 ACP1P24666 158 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 LSSP48449 732 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 ARFIP1P53367 373 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 ERVK-8P63133 956 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 AP5B1Q2VPB7 878 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 AMZ1Q400G9 498 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 AASDHQ4L235 1098 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-220ENST00000549686 NKAIN2Q5VXU1 208 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 FCRL6Q6DN72 434 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 PRR23CQ6ZRP0 262 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 CHSY3Q70JA7 882 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 RNF44Q7L0R7 432 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 PRSS42Q7Z5A4 293 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 ZFAND4Q86XD8 727 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 FAM20CQ8IXL6 584 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 OR2T11Q8NH01 316 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 IFI44Q8TCB0 444 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 PRR11Q96HE9 360 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-220ENST00000549686 TGM7Q96PF1 710 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 TRAPPC9Q96Q05 1148 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 CDC6Q99741 560 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 ZFYVE21Q9BQ24 234 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 LRRN3Q9H3W5 708 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 AHSPQ9NZD4 102 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 SLC12A4Q9UP95 1085 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 BTBD3Q9Y2F9 522 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 HCN4Q9Y3Q4 1203 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 PTGDR2Q9Y5Y4 395 aa16.66■□□□□ 0.26
LETMD1-220ENST00000549686 FEZF1A0PJY2 475 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 E9PBE3 544 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 SLC22A2O15244 555 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 KLHL41O60662 606 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 PEX11AO75192 247 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 ZBTB11O95625 1053 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-220ENST00000549686 CPNE6O95741 557 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 MYF5P13349 255 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 CD59P13987 128 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 MAPK1P28482 360 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 ADSLP30566 484 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-220ENST00000549686 BCL6P41182 706 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 ATP4BP51164 291 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 PPP1CAP62136 330 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 RPS13P62277 151 aaKnown RBP16.65■□□□□ 0.26
LETMD1-220ENST00000549686 EMX2Q04743 252 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 PWP1Q13610 501 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 GSTA3Q16772 222 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 TMEM35AQ53FP2 167 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 SPIN4Q56A73 249 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 SPDYAQ5MJ70 313 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 C6orf136Q5SQH8 315 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 MANEAQ5SRI9 462 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 PERM1Q5SV97 790 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 TMEM71Q6P5X7 295 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 NAXDQ8IW45 347 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 FAM9CQ8IZT9 166 aa16.65■□□□□ 0.26
LETMD1-220ENST00000549686 ZNF655Q8N720 491 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-220ENST00000549686 ANKRD53Q8N9V6 530 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms