RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ASB11Q8WXH4 323 aa11.52□□□□□ -0.56
RAPGEF3-219ENST00000549151 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.56
RAPGEF3-219ENST00000549151 SLIRPQ9GZT3 109 aaKnown RBP11.52□□□□□ -0.56
RAPGEF3-219ENST00000549151 SGK2Q9HBY8 427 aa11.52□□□□□ -0.56
RAPGEF3-219ENST00000549151 ACSL6Q9UKU0 697 aa11.52□□□□□ -0.56
RAPGEF3-219ENST00000549151 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.56
RAPGEF3-219ENST00000549151 TNFRSF11BO00300 401 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 PQBP1O60828 265 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 STSP08842 583 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 POU1F1P28069 291 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 CST5P28325 142 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 GABRR2P28476 465 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 CD40LGP29965 261 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 DOC2AQ14183 400 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 CBLL1Q75N03 491 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 PRSS48Q7RTY5 328 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 TMEM150AQ86TG1 271 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 FAM9CQ8IZT9 166 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 CLIP4Q8N3C7 705 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 CHST14Q8NCH0 376 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 APH1BQ8WW43 257 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 ITPAQ9BY32 194 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 RETREG1Q9H6L5 497 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 PCDHGB1Q9Y5G3 927 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 SNX8Q9Y5X2 465 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 DOCK6Q96HP0 2047 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 GABRR3A8MPY1 467 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 ZNF821O75541 412 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 ALOX12P18054 663 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 TGM1P22735 817 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 TRPC1P48995 793 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 SPIBQ01892 262 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 GAB1Q13480 694 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 DMC1Q14565 340 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 GANABQ14697 944 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 ZNF852Q6ZMS4 543 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 DPY19L3Q6ZPD9 716 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 Q6ZVU0 165 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 HEATR4Q86WZ0 1026 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 NLGN4XQ8N0W4 816 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 STX19Q8N4C7 294 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 SLC5A8Q8N695 610 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 GTPBP3Q969Y2 492 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 SUV39H2Q9H5I1 410 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 CCNB1IP1Q9NPC3 277 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 ADPRHL2Q9NX46 363 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 RHCGQ9UBD6 479 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 LSM7Q9UK45 103 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 PCDHGA6Q9Y5G7 932 aa11.52□□□□□ -0.57
RAPGEF3-219ENST00000549151 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 OR2A25A4D2G3 310 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 C8GP07360 202 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SRCP12931 536 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 ETFAP13804 333 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 HOXB9P17482 250 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SLC19A1P41440 591 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 BDKRB1P46663 353 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 CRISP3P54108 245 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 PFN3P60673 137 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SNRPD1P62314 119 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 IER5LQ5T953 404 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 ZNF783Q6ZMS7 281 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 THOC6Q86W42 341 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 CHCHD4Q8N4Q1 142 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 FAM83FQ8NEG4 500 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 OR4A15Q8NGL6 344 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 OVCA2Q8WZ82 227 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SCRN2Q96FV2 425 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 MRPL9Q9BYD2 267 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 OR51E2Q9H255 320 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 TMPRSS11EQ9UL52 423 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 J3KTA2 159 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SCN2BO60939 215 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 ATP1B2P14415 290 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 JUPP14923 745 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 GPX2P18283 190 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 TGFBR2P37173 567 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SLC6A12P48065 614 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 ITGA1P56199 1179 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 RPS3AP61247 264 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SREBF2Q12772 1141 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 ZNF404Q494X3 552 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SYTL3Q4VX76 610 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 COX20Q5RI15 118 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 Q6ZVL8 140 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 GALNT13Q8IUC8 556 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 SLC44A2Q8IWA5 706 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 OR9Q2Q8NGE9 314 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 Q96MT0 163 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 TCF25Q9BQ70 676 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 GABARAPL1Q9H0R8 117 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 IMPAD1Q9NX62 359 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 TMED5Q9Y3A6 229 aa11.51□□□□□ -0.57
RAPGEF3-219ENST00000549151 PCDHB11Q9Y5F2 797 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms