RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ELAC1Q9H777 363 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DNAJC11Q9NVH1 559 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 RAPGEFL1Q9UHV5 662 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 BTNL2Q9UIR0 455 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 MKLN1Q9UL63 735 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 FZD4Q9ULV1 537 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 MAPRE3Q9UPY8 281 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 RUVBL1Q9Y265 456 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 KLK4Q9Y5K2 254 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 PNMA8CA0A1B0GUJ8 204 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 MANSC4A6NHS7 340 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 A8MVJ9 347 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 K7ERQ8 282 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PLK4O00444 970 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PRAMEF4O60810 478 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 AOC2O75106 756 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 OR56A5P0C7T3 313 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 ANXA8P13928 327 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 HMGA1P17096 107 aaKnown RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CTGFP29279 349 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PCGF2P35227 344 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC11A1P49279 550 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 AP1S2P56377 157 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PRAMEF9Q5VWM5 478 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 SLX4IPQ5VYV7 408 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 LIPJQ5W064 366 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CLECL1Q8IZS7 167 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 METTL4Q8N3J2 472 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PCSK9Q8NBP7 692 aaKnown RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 HJURPQ8NCD3 748 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 GPR26Q8NDV2 337 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 FAM83FQ8NEG4 500 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 OR6K2Q8NGY2 324 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CHTF18Q8WVB6 975 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 FEVQ99581 238 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 COPS8Q99627 209 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 TTPALQ9BTX7 342 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 EHD1Q9H4M9 534 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 VPS29Q9UBQ0 182 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 AFF4Q9UHB7 1163 aaKnown RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC22A14Q9Y267 594 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 POFUT2Q9Y2G5 429 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 LYVE1Q9Y5Y7 322 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 IGLV3-16A0A075B6K0 115 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 C1orf226A1L170 272 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 TMEM229AB2RXF0 380 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 GFYI3L273 518 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 TNFRSF11BO00300 401 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 ADORA3P0DMS8 318 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 GABRB1P18505 474 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CYP2A7P20853 494 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 GRK5P34947 590 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CASP3P42574 277 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 RGS6P49758 472 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 UGT2B15P54855 530 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 DEFA1P59665 94 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 DEFA3P59666 94 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 SELENOWP63302 87 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 B4GALNT1Q00973 533 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CHIT1Q13231 466 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PPIGQ13427 754 aaKnown RBP eCLIP9.54□□□□□ -0.887e-8■■■□□ 17
SMARCD1-205ENST00000548573 CDH18Q13634 790 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 IRF3Q14653 427 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 DESI1Q6ICB0 168 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC8B1Q6J4K2 584 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PRSS55Q6UWB4 352 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 Q6ZPB1 254 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CCDC80Q76M96 950 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CAMKMTQ7Z624 323 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF605Q86T29 641 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CCDC103Q8IW40 242 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PAF1Q8N7H5 531 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 VPS37AQ8NEZ2 397 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 C9orf43Q8TAL5 461 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 C11orf24Q96F05 449 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 CASD1Q96PB1 797 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 DUSP26Q9BV47 211 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 C2orf49Q9BVC5 232 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 YIPF2Q9BWQ6 316 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 SPATA6Q9NWH7 488 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF226Q9NYT6 803 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 NPAP1Q9NZP6 1156 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 PCDHGA2Q9Y5H1 932 aa9.54□□□□□ -0.88
SMARCD1-205ENST00000548573 SCAMP2O15127 329 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 YY2O15391 372 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 SMAD6O43541 496 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 TLL1O43897 1013 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 NUDT7P0C024 238 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 LAMP1P11279 417 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 SPNP16150 400 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 GTF2E2P29084 291 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 SOX6P35712 828 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 ASMTP46597 345 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 GJA8P48165 433 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 LRRC74AQ0VAA2 488 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 KCNC3Q14003 757 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 ELOAQ14241 798 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 RGNQ15493 299 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 ARMCX4Q5H9R4 360 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 C10orf62Q5T681 223 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms