RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PSMA5P28066 241 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 PTGER4P35408 488 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SLC6A12P48065 614 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 ARCN1P48444 511 aaKnown RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 PITPNBP48739 271 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 FMO5P49326 533 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 HUNKP57058 714 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SELENOVP59797 346 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 PMP22Q01453 160 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SULT2A1Q06520 285 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SGCGQ13326 291 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 RIPK1Q13546 671 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 EFNB3Q15768 340 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 CARTPTQ16568 116 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 DUSP6Q16828 381 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 EPC2Q52LR7 807 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 LRRC23Q53EV4 343 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 BOLA3Q53S33 107 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 ELFN2Q5R3F8 820 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 KLC3Q6P597 504 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 DLEU7Q6UYE1 221 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 AMZ2Q86W34 360 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 COMMD2Q86X83 199 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 ZNF573Q86YE8 665 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 CROCCP3Q8IVE0 287 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 RASGEF1AQ8N9B8 481 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 BANPQ8N9N5 519 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 OR56B1Q8NGI3 324 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SLC5A11Q8WWX8 675 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 RND1Q92730 232 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 P2RX5Q93086 422 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 FAM46BQ96A09 425 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 CNDP1Q96KN2 507 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 RAD9AQ99638 391 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 BTBD10Q9BSF8 475 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 ZNF416Q9BWM5 594 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SLC2A11Q9BYW1 496 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 CCSER1Q9C0I3 900 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 VPS37BQ9H9H4 285 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 Q9N2K0 584 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 GSN-AS1Q9NRJ2 163 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 GPR173Q9NS66 373 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 FARSBQ9NSD9 589 aaKnown RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 NDUFA13Q9P0J0 144 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 WNT16Q9UBV4 365 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 NOCTQ9UK39 431 aaKnown RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 PADI3Q9ULW8 664 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SPIN1Q9Y657 262 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 NHSL1Q5SYE7 1610 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 ABCA9Q8IUA7 1624 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 UBE4BO95155 1302 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SYNRGQ9UMZ2 1314 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 XIRP1Q702N8 1843 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 A0A087X0K7 114 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 A0A0B4J203 849 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TRAV24A0A0B4J272 114 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 BECN2A8MW95 431 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 F8VVB4 439 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 F8VWA3 439 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 MS4A18H0YCH9 400 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM178BH3BS89 294 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SLC28A1O00337 649 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 VWA5AO00534 786 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 BUD23O43709 281 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 GPR137BO60478 399 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 NDUFS7O75251 213 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 GMNNO75496 209 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 BMP10O95393 424 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 LDLRP01130 860 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SP9P0CG40 484 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 CALCBP10092 127 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 THRBP10828 461 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 ITGA3P26006 1051 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 HILS1P60008 231 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 IRX4P78413 519 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 ABATP80404 500 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 CRYZQ08257 329 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 IL10RBQ08334 325 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SPP2Q13103 211 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 CTTNQ14247 550 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 RBBP7Q16576 425 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TPD52L1Q16890 204 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 ZNF284Q2VY69 593 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SYT14P1Q58G82 188 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 PRAMEF7Q5VXH5 474 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TYW3Q6IPR3 259 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 CENPPQ6IPU0 288 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 CCDC73Q6ZRK6 1079 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SLC16A12Q6ZSM3 486 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 ASPGQ86U10 573 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TMPRSS12Q86WS5 348 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 MAP7D3Q8IWC1 876 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 FOXRED2Q8IWF2 684 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 APCDD1Q8J025 514 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 L3MBTL4Q8NA19 623 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 CCDC63Q8NA47 563 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 THAP8Q8NA92 274 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms