RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 PCBD2Q9H0N5 130 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 MMP25Q9NPA2 562 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 EIF2B3Q9NR50 452 aaKnown RBP8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 TMEM184CQ9NVA4 438 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 SAMD15Q9P1V8 674 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 RUVBL2Q9Y230 463 aaKnown RBP8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 R3HDM2Q9Y2K5 976 aaKnown RBP8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 DUSP10Q9Y6W6 482 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 CELSR1Q9NYQ6 3014 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 DCHS2Q6V1P9 2916 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 ADGRG4Q8IZF6 3080 aa8.62□□□□□ -1.03
AC055716.3-201ENST00000547533 CTAGE9A4FU28 777 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 USP27XA6NNY8 438 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 GABRR3A8MPY1 467 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 FCHO1O14526 889 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 PSIP1O75475 530 aaKnown RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 VAPBO95292 243 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 SLC35G6P0C7Q6 338 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ERGP11308 486 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ENO3P13929 434 aaPredicted RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 OGNP20774 298 aaKnown RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 CD96P40200 585 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 CYB561P49447 251 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ADARP55265 1226 aaKnown RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 MEF2AQ02078 507 aaPredicted RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 NSDHLQ15738 373 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 SYT16Q17RD7 645 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ZNF425Q6IV72 752 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 SLC25A25Q6KCM7 469 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 LRRC8EQ6NSJ5 796 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 H3F3CQ6NXT2 135 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ANKRD37Q7Z713 158 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 GPATCH11Q8N954 259 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 POGLUT1Q8NBL1 392 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 MDS2Q8NDY4 140 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 OR9A4Q8NGU2 314 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 GABPB2Q8TAK5 448 aaPredicted RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 MAIP1Q8WWC4 291 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ASB5Q8WWX0 329 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ATG4AQ8WYN0 398 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 SDCCAG3Q96C92 435 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 SCMH1Q96GD3 660 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 OR1F2PQ96R84 312 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 MESP1Q9BRJ9 268 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 TSPAN10Q9H1Z9 355 aaPredicted RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 CCDC177Q9NQR7 707 aaPredicted RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 TREX1Q9NSU2 369 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 INTS10Q9NVR2 710 aaKnown RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ANKRD10Q9NXR5 420 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 LRFN1Q9P244 771 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 MARCH4Q9P2E8 410 aaPredicted RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 PPT2Q9UMR5 302 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 EDARQ9UNE0 448 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 PACSIN2Q9UNF0 486 aaPredicted RBP8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 ZNF835Q9Y2P0 537 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 CRYL1Q9Y2S2 319 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 COMMD10Q9Y6G5 202 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 HIVEP1P15822 2718 aa8.61□□□□□ -1.03
AC055716.3-201ENST00000547533 KCNE1BA0A087WTH5 132 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 IGHV3-20A0A0C4DH32 117 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 ASPDHA6ND91 283 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 ARHGEF33A8MVX0 844 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 KLRC4-KLRK1H3BQV0 150 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 H7BY64 318 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 NDC80O14777 642 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 HAT1O14929 419 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 TFECO14948 347 aaPredicted RBP8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 FOXS1O43638 330 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 NRP2O60462 931 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 PRMT3O60678 531 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 NIPSNAP2O75323 286 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 SLC25A12O75746 678 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 KRT38O76015 456 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 SLC16A8O95907 504 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 FTCDO95954 541 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 SP1P08047 785 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 CCND1P24385 295 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 BCL6P41182 706 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 GRIA1P42261 906 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 OR4D2P58180 307 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 MAT1AQ00266 395 aaKnown RBP8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 CDK16Q00536 496 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 SNX1Q13596 522 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 THOC5Q13769 683 aaKnown RBP8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 ABRAXAS2Q15018 415 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 HERC3Q15034 1050 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 OASLQ15646 514 aaKnown RBP8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 TYSND1Q2T9J0 566 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 SFT2D3Q587I9 215 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 ACSBG2Q5FVE4 666 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 CTSL3PQ5NE16 218 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 CES4AQ5XG92 561 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 FCRLBQ6BAA4 426 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 SPINK14Q6IE38 97 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 CASC4Q6P4E1 433 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 PAPD4Q6PIY7 484 aaKnown RBP8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 PAOXQ6QHF9 649 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 GALNTL5Q7Z4T8 443 aa8.6□□□□□ -1.03
AC055716.3-201ENST00000547533 PCGF5Q86SE9 256 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms