RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SRPRAP08240 638 aaKnown RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 MPC1LP0DKB6 136 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 RAP2AP10114 183 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 POU2F1P14859 743 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ITGB7P26010 798 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 CHI3L1P36222 383 aaPredicted RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 MAGEA10P43363 369 aaPredicted RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 PRIM2P49643 509 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 PRKAG1P54619 331 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 NAA20P61599 178 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ARMCX6Q7L4S7 300 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 LEMD2Q8NC56 503 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 OR9A1PQ8NGU1 263 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 DGCR6LQ9BY27 220 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ARMC7Q9H6L4 198 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 POLR1BQ9H9Y6 1135 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 AMBNQ9NP70 447 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 CLDND1Q9NY35 253 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 DPP7Q9UHL4 492 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 FZD4Q9ULV1 537 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 SH3GLB1Q9Y371 365 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 WDFY4Q6ZS81 3184 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 KCNE1BA0A087WTH5 132 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 TMX2-CTNND1H3BSU7 103 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 PSIP1O75475 530 aaKnown RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 PRPS2P11908 318 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ETFAP13804 333 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 PFKLP17858 780 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 TFF2Q03403 129 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 HIST2H2ACQ16777 129 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 MEP1AQ16819 746 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF542PQ5EBM4 170 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 HIST2H2AA3Q6FI13 130 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 KIAA1324Q6UXG2 1013 aaKnown RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 COMMD6Q7Z4G1 85 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ZDHHC21Q8IVQ6 265 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ANKFN1Q8N957 763 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 BPIFB6Q8NFQ5 453 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 TFAP2CQ92754 450 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 EXOSC8Q96B26 276 aaKnown RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 UGT2B28Q9BY64 529 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 TOR3AQ9H497 397 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 WARS2Q9UGM6 360 aaKnown RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ABCG2Q9UNQ0 655 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 MTCL1Q9Y4B5 1905 aaKnown RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 DOCK8Q8NF50 2099 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ARNTLO00327 626 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 DLGAP1O14490 977 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ACOX3O15254 700 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 OR1F1O43749 312 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 PRKRAO75569 313 aaKnown RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 SLC35G4P0C7Q5 338 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ARSFP54793 590 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 HSPB3Q12988 150 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 CST6Q15828 149 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 TNFAIP8L2Q6P589 184 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 NAGSQ8N159 534 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 CPA6Q8N4T0 437 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 GLB1L3Q8NCI6 653 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 WFIKKN2Q8TEU8 576 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 TSPEARQ8WU66 669 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 STON2Q8WXE9 905 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 COQ10AQ96MF6 247 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 TRAPPC9Q96Q05 1148 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 SH3GL1Q99961 368 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 NTN4Q9HB63 628 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 PNPLA3Q9NST1 481 aa12.25□□□□□ -0.45
SCAF11-209ENST00000547018 FAF1Q9UNN5 650 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 ASCC3Q8N3C0 2202 aaKnown RBP12.25□□□□□ -0.45
SCAF11-209ENST00000547018 PIPSLA2A3N6 862 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ANKDD1BA6NHY2 528 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 H3BQ06 376 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-209ENST00000547018 FCGR1AP12314 374 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 PRPS1L1P21108 318 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 IGFBP4P22692 258 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 GALK1P51570 392 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 IL5RAQ01344 420 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF385BQ569K4 471 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 COX20Q5RI15 118 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 GPR107Q5VW38 600 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 LPCAT2Q7L5N7 544 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 L3MBTL4Q8NA19 623 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ATG16L2Q8NAA4 619 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 UBTD2Q8WUN7 234 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 GLMNQ92990 594 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 MARK1Q9P0L2 795 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 HCN2Q9UL51 889 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 RUVBL1Q9Y265 456 aaKnown RBP12.24□□□□□ -0.45
SCAF11-209ENST00000547018 TESMINQ9Y4I5 508 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 CFAP54Q96N23 3096 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 A0A1B0GVG6 124 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 PCSK6P29122 969 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 PIGAP37287 484 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ATP6AP1Q15904 470 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 GAB4Q2WGN9 574 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 COQ5Q5HYK3 327 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ATAT1Q5SQI0 421 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms