RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 OLAHQ9NV23 265 aa13.55□□□□□ -0.24
TROAP-203ENST00000546735 ASIC3Q9UHC3 531 aa13.55□□□□□ -0.24
TROAP-203ENST00000546735 MDC1Q14676 2089 aaKnown RBP13.55□□□□□ -0.24
TROAP-203ENST00000546735 LOC102723996A0A087X1L8 192 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 DYTNA2CJ06 578 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 SGK494L7N484 410 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 EIF3FO00303 357 aaPredicted RBP13.54□□□□□ -0.24
TROAP-203ENST00000546735 DNALI1O14645 258 aaPredicted RBP13.54□□□□□ -0.24
TROAP-203ENST00000546735 SEC24DO94855 1032 aaPredicted RBP13.54□□□□□ -0.24
TROAP-203ENST00000546735 WDPCPO95876 746 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 AHSGP02765 367 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 C8orf89P0DMQ9 161 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 CDH1P12830 882 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 FDXRP22570 491 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 DCTP40126 519 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 BCL6P41182 706 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 RGS4P49798 205 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 TNFSF10P50591 281 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
TROAP-203ENST00000546735 PHKG1Q16816 387 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 ZXDCQ2QGD7 858 aaPredicted RBP13.54□□□□□ -0.24
TROAP-203ENST00000546735 HP1BP3Q5SSJ5 553 aaPredicted RBP13.54□□□□□ -0.24
TROAP-203ENST00000546735 TMEM214Q6NUQ4 689 aaKnown RBP13.54□□□□□ -0.24
TROAP-203ENST00000546735 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 MYO1HQ8N1T3 1032 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 KCT2Q8NC54 265 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 OR51Q1Q8NH59 317 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 LINGO1Q96FE5 620 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 IMMP1LQ96LU5 166 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 PWWP2AQ96N64 755 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 SLX1AQ9BQ83 275 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 RBCK1Q9BYM8 510 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 VN1R1Q9GZP7 353 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.54□□□□□ -0.24
TROAP-203ENST00000546735 PLAC1Q9HBJ0 212 aa13.54□□□□□ -0.24
TROAP-203ENST00000546735 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 GOLGA6L10A0A0M3HER8 536 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 H0YIG0 161 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 RDH16O75452 317 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 NSA2O95478 260 aaKnown RBP13.53□□□□□ -0.24
TROAP-203ENST00000546735 C8GP07360 202 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 XCR1P46094 333 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 ST13P50502 369 aaKnown RBP13.53□□□□□ -0.24
TROAP-203ENST00000546735 KCNK10P57789 538 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 MEF2AQ02078 507 aaPredicted RBP13.53□□□□□ -0.24
TROAP-203ENST00000546735 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
TROAP-203ENST00000546735 RPUSD3Q6P087 351 aaKnown RBP13.53□□□□□ -0.24
TROAP-203ENST00000546735 ASPGQ86U10 573 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 SLC26A11Q86WA9 606 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 C17orf64Q86WR6 236 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 PDSS2Q86YH6 399 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 PALM2Q8IXS6 379 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 BCORP1Q8N888 145 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 HAS2Q92819 552 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 PYCR2Q96C36 320 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 TM4SF19Q96DZ7 209 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 CYTH2Q99418 400 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 TUBB6Q9BUF5 446 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 PARVBQ9HBI1 364 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
TROAP-203ENST00000546735 TAS2R13Q9NYV9 303 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 SNX12Q9UMY4 172 aa13.53□□□□□ -0.24
TROAP-203ENST00000546735 HEATR5BQ9P2D3 2071 aa13.52□□□□□ -0.24
TROAP-203ENST00000546735 TRAV17A0A0B4J275 112 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 ZNF860A6NHJ4 632 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 A8MUI8 341 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 SLC16A5O15375 505 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 TSPAN12O95859 305 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 NPPBP16860 134 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 HRH2P25021 359 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 TDGF1P3P51864 188 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 ZNF33BQ06732 778 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 C1QL3Q5VWW1 255 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 FCRLBQ6BAA4 426 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 LRRC8EQ6NSJ5 796 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 LCTLQ6UWM7 567 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 RIPOR1Q6ZS17 1223 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 CPEB2Q7Z5Q1 589 aaKnown RBP13.52□□□□□ -0.25
TROAP-203ENST00000546735 GPATCH11Q8N954 259 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 SLC13A3Q8WWT9 602 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 CERS2Q96G23 380 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 CFAP36Q96G28 342 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 SGPP1Q9BX95 441 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 PCBD2Q9H0N5 130 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 ANKHQ9HCJ1 492 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 PPANQ9NQ55 473 aaKnown RBP13.52□□□□□ -0.25
TROAP-203ENST00000546735 IKZF3Q9UKT9 509 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 CHMP2BQ9UQN3 213 aa13.52□□□□□ -0.25
TROAP-203ENST00000546735 PCDH17O14917 1159 aa13.51□□□□□ -0.25
TROAP-203ENST00000546735 ZG16O60844 167 aa13.51□□□□□ -0.25
TROAP-203ENST00000546735 DNAJB6O75190 326 aa13.51□□□□□ -0.25
TROAP-203ENST00000546735 CDC123O75794 336 aaPredicted RBP13.51□□□□□ -0.25
TROAP-203ENST00000546735 B3GALT4O96024 378 aa13.51□□□□□ -0.25
TROAP-203ENST00000546735 HIST1H2AGP0C0S8 130 aaPredicted RBP13.51□□□□□ -0.25
TROAP-203ENST00000546735 HIST1H2ADP20671 130 aa13.51□□□□□ -0.25
TROAP-203ENST00000546735 SP140Q13342 867 aa13.51□□□□□ -0.25
TROAP-203ENST00000546735 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms