RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 FEZF1A0PJY2 475 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 B4E171 279 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 SRPX2O60687 465 aaPredicted RBP12.52□□□□□ -0.41
DDX11-227ENST00000544652 SNNO75324 88 aaPredicted RBP12.52□□□□□ -0.41
DDX11-227ENST00000544652 OR4F21O95013 312 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 FOLR1P15328 257 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 CSTF2P33240 577 aaKnown RBP eCLIP12.52□□□□□ -0.41
DDX11-227ENST00000544652 AHRP35869 848 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 TSPAN7P41732 249 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 CCR10P46092 362 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 ARL4DP49703 201 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 ABCE1P61221 599 aaKnown RBP12.52□□□□□ -0.41
DDX11-227ENST00000544652 ACY1Q03154 408 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 TARDBPQ13148 414 aaKnown RBP eCLIP12.52□□□□□ -0.41
DDX11-227ENST00000544652 STX3Q13277 289 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 KCNAB1Q14722 419 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 RBBP7Q16576 425 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 ARL13AQ5H913 290 aaPredicted RBP12.52□□□□□ -0.41
DDX11-227ENST00000544652 TMIGD1Q6UXZ0 262 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 GPRIN3Q6ZVF9 776 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 ADCK2Q7Z695 626 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 BPHLQ86WA6 291 aaPredicted RBP12.52□□□□□ -0.41
DDX11-227ENST00000544652 ANKRD53Q8N9V6 530 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 WDR20Q8TBZ3 569 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 UBE2E3Q969T4 207 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 ZNF501Q96CX3 271 aaPredicted RBP12.52□□□□□ -0.41
DDX11-227ENST00000544652 TM4SF19Q96DZ7 209 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 C20orf27Q9GZN8 174 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 RHBGQ9H310 441 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 MANSC1Q9H8J5 431 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 MID1IP1Q9NPA3 183 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 FBXO8Q9NRD0 319 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 OCIAD1Q9NX40 245 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 HAO1Q9UJM8 370 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 RNF11Q9Y3C5 154 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 SCN2AQ99250 2005 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 A0A0J9YVX5 310 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 A0A1W2PNU3 283 aaPredicted RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 ITM2AO43736 263 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 ENO1P06733 434 aaKnown RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 CHRNGP07510 517 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 FGF4P08620 206 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 FGF5P12034 268 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 HGFP14210 728 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 BCL6P41182 706 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 ID4P47928 161 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 SLC1A6P48664 564 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 MC2RQ01718 297 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 BST1Q10588 318 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 HIST2H2ACQ16777 129 aaPredicted RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 ATG16L1Q676U5 607 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 HIST2H2AA3Q6FI13 130 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 FRMPD2BQ6IN97 320 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 MED27Q6P2C8 311 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 CYB5D1Q6P9G0 228 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 RGS9BPQ6ZS82 235 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 RAB11FIP2Q7L804 512 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 VN1R4Q7Z5H5 301 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 CUZD1Q86UP6 607 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 PLD3Q8IV08 490 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 MCATQ8IVS2 390 aaKnown RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 CHCHD4Q8N4Q1 142 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 TBC1D19Q8N5T2 526 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 TTLQ8NG68 377 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 OR7G3Q8NG95 312 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 PPP1R14CQ8TAE6 165 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 MAGEB18Q96M61 343 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 FCRL4Q96PJ5 515 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 SORT1Q99523 831 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 SLC29A3Q9BZD2 475 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 EML4Q9HC35 981 aaKnown RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 TNFRSF12AQ9NP84 129 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 FGF21Q9NSA1 209 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 AKAP7Q9P0M2 348 aaPredicted RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 ZFP69BQ9UJL9 534 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 WASF3Q9UPY6 502 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.51□□□□□ -0.41
DDX11-227ENST00000544652 LOXL2Q9Y4K0 774 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 PCDHGA11Q9Y5H2 935 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 AP1M2Q9Y6Q5 423 aa12.51□□□□□ -0.41
DDX11-227ENST00000544652 CFAP54Q96N23 3096 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 LOC105369274A0A096LPK9 316 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 LOC102723532A0A0G2JNH3 316 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 FITM1A5D6W6 292 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 EFCAB7A8K855 629 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 H0YGG7 62 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 OR1F1O43749 312 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 CLEC3AO75596 197 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 CAPN1P07384 714 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 NEFHP12036 1026 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 SERPINB1P30740 379 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 ARF3P61204 181 aaPredicted RBP12.5□□□□□ -0.41
DDX11-227ENST00000544652 OCRLQ01968 901 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 ZNF33BQ06732 778 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 CYP4F3Q08477 520 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 TUBB3Q13509 450 aa12.5□□□□□ -0.41
DDX11-227ENST00000544652 IL11RAQ14626 422 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms