RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 RBBP5Q15291 538 aaKnown RBP13.02□□□□□ -0.33
SP140-213ENST00000543928 RBBP7Q16576 425 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 TBC1D25Q3MII6 688 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 TTMPQ5BVD1 217 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 PAGE2BQ5JRK9 111 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 TLDC1Q6P9B6 456 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 TMIGD1Q6UXZ0 262 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 VN1R4Q7Z5H5 301 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 MYLK4Q86YV6 388 aaPredicted RBP13.02□□□□□ -0.33
SP140-213ENST00000543928 KRT78Q8N1N4 520 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ZNF655Q8N720 491 aaPredicted RBP13.02□□□□□ -0.33
SP140-213ENST00000543928 CSNK1A1LQ8N752 337 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 CCNYL1Q8N7R7 359 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 OR52B6Q8NGF0 335 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ATP6V1E2Q96A05 226 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 THAP11Q96EK4 314 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ATP6V1G3Q96LB4 118 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ZNF578Q96N58 590 aaPredicted RBP13.02□□□□□ -0.33
SP140-213ENST00000543928 EFCAB11Q9BUY7 163 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 MECRQ9BV79 373 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 TMEM121BQ9BXQ6 578 aaPredicted RBP13.02□□□□□ -0.33
SP140-213ENST00000543928 ULBP3Q9BZM4 244 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ACBD3Q9H3P7 528 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ACTR8Q9H981 624 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 PCDHB3Q9Y5E6 796 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 WDFY3Q8IZQ1 3526 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 TMEM120BA0PK00 339 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 PPP6CO00743 305 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 P2RX6O15547 441 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 ZNF749O43361 778 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 TRIM13O60858 407 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 STK17BO94768 372 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 NTRK1P04629 796 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 ALDH3A1P30838 453 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 NAGLUP54802 743 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 CLCQ05315 142 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 TRAF3Q13114 568 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 LAPTM5Q13571 262 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 COL9A2Q14055 689 aaPredicted RBP13.01□□□□□ -0.33
SP140-213ENST00000543928 E2F2Q14209 437 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 GRM7Q14831 915 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 HIST2H2ACQ16777 129 aaPredicted RBP13.01□□□□□ -0.33
SP140-213ENST00000543928 HKDC1Q2TB90 917 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 LIPMQ5VYY2 423 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 HIST2H2AA3Q6FI13 130 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 GRHL2Q6ISB3 625 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 ASPGQ86U10 573 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 ZFAND4Q86XD8 727 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 ANKRD42Q8N9B4 389 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 ANKRD53Q8N9V6 530 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 TTC29Q8NA56 475 aaPredicted RBP13.01□□□□□ -0.33
SP140-213ENST00000543928 TRPC4APQ8TEL6 797 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 PKNOX2Q96KN3 472 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 CDK15Q96Q40 435 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 SLC7A5P2Q9GIP4 190 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 PITHD1Q9GZP4 211 aaPredicted RBP13.01□□□□□ -0.33
SP140-213ENST00000543928 GSTO2Q9H4Y5 243 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 CCDC86Q9H6F5 360 aaKnown RBP13.01□□□□□ -0.33
SP140-213ENST00000543928 NT5DC2Q9H857 520 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 ACTR5Q9H9F9 607 aaPredicted RBP13.01□□□□□ -0.33
SP140-213ENST00000543928 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 RNF11Q9Y3C5 154 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 TMEM184BQ9Y519 407 aaPredicted RBP13.01□□□□□ -0.33
SP140-213ENST00000543928 AP1M2Q9Y6Q5 423 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 SDK2Q58EX2 2172 aa13.01□□□□□ -0.33
SP140-213ENST00000543928 HYKKA2RU49 373 aa13□□□□□ -0.33
SP140-213ENST00000543928 FITM1A5D6W6 292 aa13□□□□□ -0.33
SP140-213ENST00000543928 C1QTNF9BB2RNN3 333 aa13□□□□□ -0.33
SP140-213ENST00000543928 TXNDC9O14530 226 aa13□□□□□ -0.33
SP140-213ENST00000543928 UGDHO60701 494 aa13□□□□□ -0.33
SP140-213ENST00000543928 CPNE3O75131 537 aaKnown RBP13□□□□□ -0.33
SP140-213ENST00000543928 CLDN9O95484 217 aa13□□□□□ -0.33
SP140-213ENST00000543928 DLGAP3O95886 979 aa13□□□□□ -0.33
SP140-213ENST00000543928 OTCP00480 354 aa13□□□□□ -0.33
SP140-213ENST00000543928 SERPIND1P05546 499 aa13□□□□□ -0.33
SP140-213ENST00000543928 BPGMP07738 259 aa13□□□□□ -0.33
SP140-213ENST00000543928 C1QTNF9P0C862 333 aa13□□□□□ -0.33
SP140-213ENST00000543928 CD82P27701 267 aa13□□□□□ -0.33
SP140-213ENST00000543928 AHRP35869 848 aa13□□□□□ -0.33
SP140-213ENST00000543928 HNF4AP41235 474 aa13□□□□□ -0.33
SP140-213ENST00000543928 SERPINB4P48594 390 aa13□□□□□ -0.33
SP140-213ENST00000543928 NAA20P61599 178 aa13□□□□□ -0.33
SP140-213ENST00000543928 CYP4F2P78329 520 aa13□□□□□ -0.33
SP140-213ENST00000543928 ASPHQ12797 758 aa13□□□□□ -0.33
SP140-213ENST00000543928 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
SP140-213ENST00000543928 CFAP157Q5JU67 520 aa13□□□□□ -0.33
SP140-213ENST00000543928 LIPJQ5W064 366 aa13□□□□□ -0.33
SP140-213ENST00000543928 MED27Q6P2C8 311 aa13□□□□□ -0.33
SP140-213ENST00000543928 UNQ6494/PRO21346Q6UXR6 183 aa13□□□□□ -0.33
SP140-213ENST00000543928 MILR1Q7Z6M3 343 aa13□□□□□ -0.33
SP140-213ENST00000543928 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13□□□□□ -0.33
SP140-213ENST00000543928 L3MBTL4Q8NA19 623 aa13□□□□□ -0.33
SP140-213ENST00000543928 SLC38A9Q8NBW4 561 aa13□□□□□ -0.33
SP140-213ENST00000543928 CAMKVQ8NCB2 501 aa13□□□□□ -0.33
SP140-213ENST00000543928 GALNT6Q8NCL4 622 aa13□□□□□ -0.33
SP140-213ENST00000543928 SLC13A3Q8WWT9 602 aa13□□□□□ -0.33
SP140-213ENST00000543928 UBE2E3Q969T4 207 aa13□□□□□ -0.33
SP140-213ENST00000543928 CLIP3Q96DZ5 547 aa13□□□□□ -0.33
SP140-213ENST00000543928 TM4SF19Q96DZ7 209 aa13□□□□□ -0.33
SP140-213ENST00000543928 MACROD1Q9BQ69 325 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms