RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TMIGD1Q6UXZ0 262 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 MSANTD1Q6ZTZ1 278 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 CCDC80Q76M96 950 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 RIMKLAQ8IXN7 391 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 PHACTR4Q8IZ21 702 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 EFCAB3Q8N7B9 438 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 CCL4L1Q8NHW4 92 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 SLC13A3Q8WWT9 602 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 RLN3Q8WXF3 142 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 SNX19Q92543 992 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 SLC6A18Q96N87 628 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 TMEM74Q96NL1 305 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 NRTNQ99748 197 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 GSDMCQ9BYG8 508 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 CD300AQ9UGN4 299 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 BCAP29Q9UHQ4 241 aa8.97□□□□□ -0.97
GNE-206ENST00000543356 C15orf38-AP3S2A0A0A6YYH1 394 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 FKBP6O75344 327 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 CCNDBP1O95273 360 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 XRCC1P18887 633 aaPredicted RBP8.96□□□□□ -0.97
GNE-206ENST00000543356 PSMB5P28074 263 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 SLC7A2P52569 658 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 RAE1P78406 368 aaKnown RBP8.96□□□□□ -0.97
GNE-206ENST00000543356 PRDX1Q06830 199 aaKnown RBP8.96□□□□□ -0.97
GNE-206ENST00000543356 GALNT18Q6P9A2 607 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 AAGABQ6PD74 315 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 SLC2A7Q6PXP3 512 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 VN1R5Q7Z5H4 357 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 ARPINQ7Z6K5 226 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 DHDDSQ86SQ9 333 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 CACTIN-AS1Q8N1I8 211 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 KRTCAP2Q8N6L1 136 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 OR2A1Q8NGT9 310 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 ZFPM2Q8WW38 1151 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 STARD8Q92502 1023 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 ASB9Q96DX5 294 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 KLHDC7BQ96G42 594 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 ACAT2Q9BWD1 397 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 TWSG1Q9GZX9 223 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 XKR8Q9H6D3 395 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 CUEDC1Q9NWM3 386 aaPredicted RBP8.96□□□□□ -0.97
GNE-206ENST00000543356 OR6C2Q9NZP2 312 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 ZNF624Q9P2J8 865 aaPredicted RBP8.96□□□□□ -0.97
GNE-206ENST00000543356 THEGQ9P2T0 379 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 MAPRE3Q9UPY8 281 aa8.96□□□□□ -0.97
GNE-206ENST00000543356 MAP3K7O43318 606 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 KRT36O76013 467 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 PGRP06401 933 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 PRPS1L1P21108 318 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 SLC6A2P23975 617 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 TACR1P25103 407 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 TIA1P31483 386 aaKnown RBP eCLIP8.96□□□□□ -0.98
GNE-206ENST00000543356 ASMTP46597 345 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 BLKP51451 505 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 HNRNPFP52597 415 aaKnown RBP8.96□□□□□ -0.98
GNE-206ENST00000543356 DGKQP52824 942 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 MEF2AQ02078 507 aaPredicted RBP8.96□□□□□ -0.98
GNE-206ENST00000543356 MTAPQ13126 283 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 PWP1Q13610 501 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 DPY19L1Q2PZI1 675 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 FAM174BQ3ZCQ3 159 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 OR52E8Q6IFG1 317 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 IQCHQ86VS3 1027 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 PARGQ86W56 976 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 SYT12Q8IV01 421 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.96□□□□□ -0.98
GNE-206ENST00000543356 C1orf52Q8N6N3 182 aaKnown RBP8.96□□□□□ -0.98
GNE-206ENST00000543356 DNAJB8Q8NHS0 232 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 CLHC1Q8NHS4 586 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 CXorf40BQ96DE9 158 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 SPACA7Q96KW9 195 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 SLC39A3Q9BRY0 314 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 EBPLQ9BY08 206 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 PCDHA9Q9Y5H5 950 aa8.96□□□□□ -0.98
GNE-206ENST00000543356 PRORSD1PA6NEY8 169 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 NME4O00746 187 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 ACOT8O14734 319 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 BCAS2O75934 225 aaPredicted RBP8.95□□□□□ -0.98
GNE-206ENST00000543356 SEMA3DO95025 777 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 PTX3P26022 381 aaPredicted RBP8.95□□□□□ -0.98
GNE-206ENST00000543356 PEBP1P30086 187 aaKnown RBP8.95□□□□□ -0.98
GNE-206ENST00000543356 TRAP1Q12931 704 aaKnown RBP8.95□□□□□ -0.98
GNE-206ENST00000543356 RCN1Q15293 331 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 SPANXN4Q5MJ08 99 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 SLC36A4Q6YBV0 504 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 AMIGO1Q86WK6 493 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 METTL4Q8N3J2 472 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 MFSD2AQ8NA29 543 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 ZBTB8BQ8NAP8 495 aaPredicted RBP8.95□□□□□ -0.98
GNE-206ENST00000543356 ZNF740Q8NDX6 193 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 TMEM125Q96AQ2 219 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 TSSK3Q96PN8 268 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 IL1RL2Q9HB29 575 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 AASDHPPTQ9NRN7 309 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 INIPQ9NRY2 104 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 NKX1-2Q9UD57 310 aaPredicted RBP8.95□□□□□ -0.98
GNE-206ENST00000543356 PACSIN3Q9UKS6 424 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 PCM1Q15154 2024 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 FANCMQ8IYD8 2048 aa8.95□□□□□ -0.98
GNE-206ENST00000543356 hCG_2014768A0A024R1R8 64 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms