RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 EEF1AKMT1Q8WVE0 214 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 MAGEB10Q96LZ2 347 aaPredicted RBP12.44□□□□□ -0.42
RTN3-212ENST00000543123 HAUS8Q9BT25 410 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 TRIM54Q9BYV2 358 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 RNF32Q9H0A6 362 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 ANKHQ9HCJ1 492 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 OLAHQ9NV23 265 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 SNX12Q9UMY4 172 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 MDC1Q14676 2089 aaKnown RBP12.44□□□□□ -0.42
RTN3-212ENST00000543123 POLEQ07864 2286 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 DNALI1O14645 258 aaPredicted RBP12.43□□□□□ -0.42
RTN3-212ENST00000543123 FFAR3O14843 346 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 GPR42O15529 346 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 KLHL18O94889 574 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 F7P08709 466 aaPredicted RBP12.43□□□□□ -0.42
RTN3-212ENST00000543123 RNF224P0DH78 156 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 TCP1P17987 556 aaKnown RBP12.43□□□□□ -0.42
RTN3-212ENST00000543123 AGTR2P50052 363 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 TNFSF10P50591 281 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 AP1S2P56377 157 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 IL2P60568 153 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
RTN3-212ENST00000543123 MINDY4Q4G0A6 757 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 ABHD17BQ5VST6 288 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 CAPN13Q6MZZ7 669 aaPredicted RBP12.43□□□□□ -0.42
RTN3-212ENST00000543123 NIPAL1Q6NVV3 410 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 AGTRAPQ6RW13 159 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 SYDE1Q6ZW31 735 aaPredicted RBP12.43□□□□□ -0.42
RTN3-212ENST00000543123 CNTN4Q8IWV2 1026 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 PDIK1LQ8N165 341 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 AGGF1Q8N302 714 aaeCLIP12.43□□□□□ -0.42
RTN3-212ENST00000543123 SLC35F6Q8N357 371 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 SIRT6Q8N6T7 355 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 OR9A4Q8NGU2 314 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 ATL1Q8WXF7 558 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 HAS2Q92819 552 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 SLCO2A1Q92959 643 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 LINGO1Q96FE5 620 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 RUNDC3BQ96NL0 473 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 NDNQ99608 321 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 SLX1AQ9BQ83 275 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■□□□□ 8.9
RTN3-212ENST00000543123 PPANQ9NQ55 473 aaKnown RBP12.43□□□□□ -0.42
RTN3-212ENST00000543123 PDE10AQ9Y233 779 aa12.43□□□□□ -0.42
RTN3-212ENST00000543123 E2F3O00716 465 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 IL10P22301 178 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 XCR1P46094 333 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 CCR8P51685 355 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 CSNK1G2P78368 415 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 MAT1AQ00266 395 aaKnown RBP12.42□□□□□ -0.42
RTN3-212ENST00000543123 DHX9Q08211 1270 aaKnown RBP12.42□□□□□ -0.42
RTN3-212ENST00000543123 NAE1Q13564 534 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 MORF4L2Q15014 288 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 PCOLCEQ15113 449 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 CRYBG3Q68DQ2 2970 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 TMEM214Q6NUQ4 689 aaKnown RBP12.42□□□□□ -0.42
RTN3-212ENST00000543123 LCTLQ6UWM7 567 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 VN1R4Q7Z5H5 301 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 ASPGQ86U10 573 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 OR51Q1Q8NH59 317 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 PSMF1Q92530 271 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 CERS2Q96G23 380 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 MESP1Q9BRJ9 268 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 SGPP1Q9BX95 441 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 VN1R1Q9GZP7 353 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 SYNPO2LQ9H987 977 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 ARL15Q9NXU5 204 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 ABI3Q9P2A4 366 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 ADAMTS6Q9UKP5 1117 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 OSGIN2Q9Y236 505 aa12.42□□□□□ -0.42
RTN3-212ENST00000543123 A0A1B0GUH1 482 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 CRYABP02511 175 aaKnown RBP12.41□□□□□ -0.42
RTN3-212ENST00000543123 ENO2P09104 434 aaPredicted RBP12.41□□□□□ -0.42
RTN3-212ENST00000543123 CDH1P12830 882 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 IL1RNP18510 177 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 BCL6P41182 706 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 CDKN2DP55273 166 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 ZNF33BQ06732 778 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 HERC3Q15034 1050 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 EXT1Q16394 746 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 SYT16Q17RD7 645 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 BBS9Q3SYG4 887 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 DUPD1Q68J44 220 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 PLAG1Q6DJT9 500 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 FAM45BPQ6NSW5 357 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 HIBCHQ6NVY1 386 aaPredicted RBP12.41□□□□□ -0.42
RTN3-212ENST00000543123 PAQR3Q6TCH7 311 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 CPEB2Q7Z5Q1 589 aaKnown RBP12.41□□□□□ -0.42
RTN3-212ENST00000543123 CATSPER1Q8NEC5 780 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 FAM45AQ8TCE6 357 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 SLC13A3Q8WWT9 602 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 ALKBH8Q96BT7 664 aaKnown RBP12.41□□□□□ -0.42
RTN3-212ENST00000543123 OR1F2PQ96R84 312 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
RTN3-212ENST00000543123 ATG10Q9H0Y0 220 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 HCN3Q9P1Z3 774 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 SLC22A7Q9Y694 548 aa12.41□□□□□ -0.42
RTN3-212ENST00000543123 CELSR2Q9HCU4 2923 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms