RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CAPN5O15484 640 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 SOD2P04179 222 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 EDNRAP25101 427 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 FMO3P31513 532 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CSTF2P33240 577 aaKnown RBP eCLIP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 RPS21P63220 83 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TUBA1BP68363 451 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TUBA4AP68366 448 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CDK6Q00534 326 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NPY5RQ15761 445 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 RNF220Q5VTB9 566 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 Q6ZVU0 165 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TUBA1AQ71U36 451 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TSPEARQ8WU66 669 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NPY6RQ99463 290 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 SLC2A11Q9BYW1 496 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TNFRSF10DQ9UBN6 386 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 STYXL1Q9Y6J8 313 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CDC7O00311 574 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 EI24O14681 340 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CREG1O75629 220 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PEPDP12955 493 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GP1BBP13224 206 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 EFNA1P20827 205 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 SNTA1Q13424 505 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ACSBG2Q5FVE4 666 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ARHGAP40Q5TG30 622 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CHRDL2Q6WN34 429 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 C12orf40Q86WS4 652 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NFKBIDQ8NI38 313 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 HMGB4Q8WW32 186 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ESAMQ96AP7 390 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TSGA13Q96PP4 275 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 EBF4Q9BQW3 602 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CLDND1Q9NY35 253 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM59LQ9UK28 342 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 INSL5Q9Y5Q6 135 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 C5P01031 1676 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF536O15090 1300 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GRID2O43424 1007 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 SCGNO76038 276 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PRKCGP05129 697 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 S100A1P23297 94 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GALK1P51570 392 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TAS2R43P59537 309 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 RIPPLY1Q0D2K3 151 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GANABQ14697 944 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TEAD2Q15562 447 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 KCTD19Q17RG1 926 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PITRM1Q5JRX3 1037 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PHF19Q5T6S3 580 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ALG1LQ6GMV1 187 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 INO80EQ8NBZ0 244 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PLA2G15Q8NCC3 412 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PYCR2Q96C36 320 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ELAC1Q9H777 363 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 MAFFQ9ULX9 164 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 LRRC42Q9Y546 428 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 EVPLQ92817 2033 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ACOX3O15254 700 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 OR1I1O60431 355 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PEX10O60683 326 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 RPS13P62277 151 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NFATC2Q13469 925 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ABCA11PQ4W5N1 156 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 C22orf39Q6P5X5 142 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF550Q7Z398 422 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 COQ8BQ96D53 544 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GALPQ9UBC7 116 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CYTH4Q9UIA0 394 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NOX1Q9Y5S8 564 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ANKRD36CQ5JPF3 1778 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NPIPA5E9PKD4 350 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PIRO00625 290 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ARPC2O15144 300 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TSPAN9O75954 239 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 HMGCS1Q01581 520 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 OC90Q02509 493 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CBFBQ13951 182 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 GBX1Q14549 363 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF805Q5CZA5 627 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 OR4F3Q6IEY1 312 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PYHIN1Q6K0P9 492 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF782Q6ZMW2 699 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 GRASPQ7Z6J2 395 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 AQP11Q8NBQ7 271 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 SGCDQ92629 289 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 YIPF4Q9BSR8 244 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ITPAQ9BY32 194 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MINDY3Q9H8M7 445 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TM9SF3Q9HD45 589 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 NPIPA1Q9UND3 350 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 LRP6O75581 1613 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MTMR11A4FU01 709 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 SOX30O94993 753 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ENDOUP21128 410 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms