RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 OR56A5P0C7T3 313 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 LAMP1P11279 417 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 RRM2P31350 389 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 S100A5P33763 92 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 PCYT1AP49585 367 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 GATMP50440 423 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 CHIT1Q13231 466 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 HKDC1Q2TB90 917 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 LIPJQ5W064 366 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 SLC8B1Q6J4K2 584 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 Q6ZPB1 254 aaPredicted RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 TSEN54Q7Z6J9 526 aaKnown RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 TSPAN33Q86UF1 283 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 IFNL1Q8IU54 200 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 CLECL1Q8IZS7 167 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 CRELD1Q96HD1 420 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 METTL2AQ96IZ6 378 aaKnown RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 COL21A1Q96P44 957 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 FEVQ99581 238 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 COPS8Q99627 209 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 SLX1AQ9BQ83 275 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 EBPLQ9BY08 206 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 C6orf62Q9GZU0 229 aaPredicted RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 HOXD1Q9GZZ0 328 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 VPS29Q9UBQ0 182 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 BTNL2Q9UIR0 455 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 RUVBL1Q9Y265 456 aaKnown RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 SLC22A14Q9Y267 594 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 PCDHB7Q9Y5E2 793 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 PEX16Q9Y5Y5 336 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 C2orf78A6NCI8 922 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 A8MX80 341 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 NT5C1B-RDH14C9J2C7 533 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 TNFRSF11BO00300 401 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 HAT1O14929 419 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 UGDHO60701 494 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 SNX4O95219 450 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 DLGAP3O95886 979 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 GALTP07902 379 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ANXA8P13928 327 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 S100A1P23297 94 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PTX3P26022 381 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 GKP32189 559 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 GRK5P34947 590 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PCGF2P35227 344 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ETV6P41212 452 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 AP1S2P56377 157 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 SELENOWP63302 87 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 SP140Q13342 867 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 IRF3Q14653 427 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 LRIT3Q3SXY7 679 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 TOR1AIP1Q5JTV8 583 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 CRTC1Q6UUV9 634 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 APCDD1Q8J025 514 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PARP16Q8N5Y8 322 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 FAM83FQ8NEG4 500 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 DENND6BQ8NEG7 585 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 WFDC5Q8TCV5 224 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ZNF675Q8TD23 568 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 C11orf24Q96F05 449 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 YME1L1Q96TA2 773 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 DUSP26Q9BV47 211 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 C2orf49Q9BVC5 232 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 ABCG8Q9H221 673 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 MOV10Q9HCE1 1003 aaKnown RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 SPATA6Q9NWH7 488 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 ZNF226Q9NYT6 803 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 GABRQQ9UN88 632 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 MAPRE3Q9UPY8 281 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 IFT52Q9Y366 437 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PCDHGA2Q9Y5H1 932 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 KLK4Q9Y5K2 254 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 LYVE1Q9Y5Y7 322 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 C1orf226A1L170 272 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 NPIPB15A6NHN6 443 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 UPK3BL1B0FP48 263 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 UPK3BL2E5RIL1 263 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ADAMDEC1O15204 470 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ASNA1O43681 348 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 AOC2O75106 756 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 GCM2O75603 506 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 NUDT7P0C024 238 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 SPNP16150 400 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PTPN2P17706 415 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 GABRB1P18505 474 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 CYP2A7P20853 494 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 ITPKAP23677 461 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 CCND3P30281 292 aaPredicted RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 OR1D2P34982 312 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 SEPHS1P49903 392 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PFN3P60673 137 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 HSPA14Q0VDF9 509 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 PPIGQ13427 754 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH13-204ENST00000539548 CDH18Q13634 790 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 EIF4HQ15056 248 aaKnown RBP9.33□□□□□ -0.92
CDH13-204ENST00000539548 RGNQ15493 299 aa9.33□□□□□ -0.92
CDH13-204ENST00000539548 TEAD4Q15561 434 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms