RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 GALPQ9UBC7 116 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 RAB21Q9UL25 225 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 CORO1CQ9ULV4 474 aaPredicted RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 PSAT1Q9Y617 370 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 CNTRLQ7Z7A1 2325 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 IGLV3-12A0A075B6K2 115 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 E5RI56 91 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 MYO1CO00159 1063 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 E2F3O00716 465 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 PSIP1O75475 530 aaKnown RBP13.31□□□□□ -0.28
CCND1-204ENST00000539241 HAUS5O94927 633 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 AHSGP02765 367 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 CATP04040 527 aaKnown RBP13.31□□□□□ -0.28
CCND1-204ENST00000539241 F7P08709 466 aaPredicted RBP13.31□□□□□ -0.28
CCND1-204ENST00000539241 COL8A1P27658 744 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 CDC16Q13042 620 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 MFAP5Q13361 173 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 TSTA3Q13630 321 aaPredicted RBP13.31□□□□□ -0.28
CCND1-204ENST00000539241 ARHGAP19Q14CB8 494 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 TLR1Q15399 786 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 KLHL38Q2WGJ6 581 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 KBTBD12Q3ZCT8 623 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 VWA2Q5GFL6 755 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 UBAP2Q5T6F2 1119 aaKnown RBP13.31□□□□□ -0.28
CCND1-204ENST00000539241 ATG9BQ674R7 924 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 B3GNTL1Q67FW5 361 aaPredicted RBP13.31□□□□□ -0.28
CCND1-204ENST00000539241 ZNF787Q6DD87 383 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 EMBQ6PCB8 327 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 ISLR2Q6UXK2 745 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 LINC00696Q6ZRV3 163 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 STRA8Q7Z7C7 330 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 PAQR7Q86WK9 346 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 CTAGE3PQ8IX95 158 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 CSNK1A1LQ8N752 337 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 GRHL3Q8TE85 626 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 AENQ8WTP8 325 aaKnown RBP13.31□□□□□ -0.28
CCND1-204ENST00000539241 CYTH2Q99418 400 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 PKP4Q99569 1192 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 CPNE1Q99829 537 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 RHOJQ9H4E5 214 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 TXNDC16Q9P2K2 825 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 CDC14AQ9UNH5 594 aa13.31□□□□□ -0.28
CCND1-204ENST00000539241 MYO9AB2RTY4 2548 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 A0A087WUV0 522 aaPredicted RBP13.3□□□□□ -0.28
CCND1-204ENST00000539241 NSG1A0A0A6YYJ2 146 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 IGKV1-8A0A0C4DH67 115 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 ZNF839A8K0R7 811 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 CXorf49A8MYA2 514 aaPredicted RBP13.3□□□□□ -0.28
CCND1-204ENST00000539241 PRPF4O43172 522 aaKnown RBP eCLIP13.3□□□□□ -0.282e-6■■■□□ 18.1
CCND1-204ENST00000539241 RIPK2O43353 540 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 PIAS1O75925 651 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 KLHL18O94889 574 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 CCNDBP1O95273 360 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 HSD17B2P37059 387 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 GP5P40197 560 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 PNLIPRP1P54315 467 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 EMP2P54851 167 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 EMP3P54852 163 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 DSG2Q14126 1118 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 TTLL9Q3SXZ7 439 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 ZNF549Q6P9A3 640 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 ZC3HC1Q86WB0 502 aaKnown RBP13.3□□□□□ -0.28
CCND1-204ENST00000539241 PPM1NQ8N819 430 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 FAR1Q8WVX9 515 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 KCNJ9Q92806 393 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 MVB12AQ96EY5 273 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 LMF1Q96S06 567 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 AARSD1Q9BTE6 412 aaKnown RBP13.3□□□□□ -0.28
CCND1-204ENST00000539241 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 SYNPO2LQ9H987 977 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 C14orf105Q9NVL8 296 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 UTP6Q9NYH9 597 aaKnown RBP13.3□□□□□ -0.28
CCND1-204ENST00000539241 TRPC4Q9UBN4 977 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 TAC3Q9UHF0 121 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 RUVBL1Q9Y265 456 aaKnown RBP13.3□□□□□ -0.28
CCND1-204ENST00000539241 PCM1Q15154 2024 aa13.3□□□□□ -0.28
CCND1-204ENST00000539241 IDSB3KWA1 339 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 FFAR3O14843 346 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 GPR42O15529 346 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 COX6A1P12074 109 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 EDN3P14138 238 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 CXCR2P25025 360 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 CLCN7P51798 805 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 EEF1A2Q05639 463 aaKnown RBP13.29□□□□□ -0.28
CCND1-204ENST00000539241 PRDX1Q06830 199 aaKnown RBP13.29□□□□□ -0.28
CCND1-204ENST00000539241 NAA30Q147X3 362 aaPredicted RBP13.29□□□□□ -0.28
CCND1-204ENST00000539241 EFTUD2Q15029 972 aaKnown RBP eCLIP13.29□□□□□ -0.285e-7■■■□□ 16.4
CCND1-204ENST00000539241 HKDC1Q2TB90 917 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 GARNL3Q5VVW2 1013 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 ICE2Q659A1 982 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 ZNF425Q6IV72 752 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 NEK10Q6ZWH5 1172 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 NDUFAF7Q7L592 441 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 LAPTM4BQ86VI4 370 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 KBTBD2Q8IY47 623 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 PPFIBP2Q8ND30 876 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 CATSPER1Q8NEC5 780 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 GIMAP7Q8NHV1 300 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 CAVIN3Q969G5 261 aa13.29□□□□□ -0.28
CCND1-204ENST00000539241 RERGQ96A58 199 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms