RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 DPAGT1Q9H3H5 408 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 WDR26Q9H7D7 661 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 CMAHPQ9Y471 501 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 NARSO43776 548 aaKnown RBP13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 S100A2P29034 98 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 MLLT3P42568 568 aaPredicted RBP13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 SMSP52788 366 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 NOGQ13253 232 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 SGCBQ16585 318 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 CMTR2Q8IYT2 770 aaKnown RBP13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 ZBTB8BQ8NAP8 495 aaPredicted RBP13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 SMG8Q8ND04 991 aaKnown RBP13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 ARNTL2Q8WYA1 636 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 CCM2Q9BSQ5 444 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 DNAJC27Q9NZQ0 273 aa13.79□□□□□ -0.2
PLXNB3-209ENST00000538966 MANBAO00462 879 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 IFNA7P01567 189 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 RFTN1Q14699 578 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 C9orf43Q8TAL5 461 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 HCAR2Q8TDS4 363 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 CAMK1GQ96NX5 476 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ZIM2Q9NZV7 527 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 FBXL3Q9UKT7 428 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 HMGN1P05114 100 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 C8BP07358 591 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ATP1B2P14415 290 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ELK4P28324 431 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 RNF144AP50876 292 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 PTPRCAPQ14761 206 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 TMEM110Q86TL2 294 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 OR52E4Q8NGH9 312 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 NCSTNQ92542 709 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 C12orf43Q96C57 262 aaKnown RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 FUZQ9BT04 418 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 AKAP12Q02952 1782 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 DUXAA6NLW8 204 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 E7EQ34 232 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 VNN2O95498 520 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ALPPL2P10696 532 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 VAMP1P23763 118 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ASTE1Q2TB18 679 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ZC3HC1Q86WB0 502 aaKnown RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 SLC7A6OSQ96CW6 309 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 POLE4Q9NR33 117 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 PLCL2Q9UPR0 1127 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 CREG1O75629 220 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 SLC15A1P46059 708 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 APLP1P51693 650 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 CLCNKAP51800 687 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 RPL19P84098 196 aaKnown RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 EIF2S3LQ2VIR3 472 aaKnown RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 XKR5Q6UX68 686 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 OR2L2Q8NH16 312 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ZNF431Q8TF32 576 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 OVCA2Q8WZ82 227 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 FZD8Q9H461 694 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 THUMPD1Q9NXG2 353 aaKnown RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 HS3ST4Q9Y661 456 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 M0QX08 132 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 AKAP8O43823 692 aaKnown RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 CDK6Q00534 326 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 KCTD9Q7L273 389 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 LRRC70Q7Z2Q7 622 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 SAMD14Q8IZD0 417 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ZNF471Q9BX82 626 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 ZBTB26Q9HCK0 441 aa13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 STOX2Q9P2F5 926 aaPredicted RBP13.78□□□□□ -0.2
PLXNB3-209ENST00000538966 A0A0G2JPF8 293 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 HNRNPCL3B7ZW38 293 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 I3L521 148 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 YES1P07947 543 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 HNRNPCL4P0DMR1 293 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 SMYD5Q6GMV2 418 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 OR8S1Q8NH09 359 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 A8MU76 341 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 C6orf47O95873 294 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 RPS13P62277 151 aaKnown RBP13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 TRIM74Q86UV6 250 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 TRIM73Q86UV7 250 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 PNLDC1Q8NA58 520 aaKnown RBP13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 SLC22A17Q8WUG5 538 aa13.77□□□□□ -0.2
PLXNB3-209ENST00000538966 PHLPP1O60346 1717 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 RBM34P42696 430 aaKnown RBP13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 KCNQ1P51787 676 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 OGDHQ02218 1023 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 GRSF1Q12849 480 aaKnown RBP eCLIP13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 ALPK1Q96QP1 1244 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 NDC1Q9BTX1 674 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 DNAJB4Q9UDY4 337 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 FBXO9Q9UK97 447 aaPredicted RBP13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 TRAV6A0A075B6T7 132 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 NRP1O14786 923 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 ATP5A1P25705 553 aaKnown RBP13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 TAS2R50P59544 299 aa13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 MLLT1Q03111 559 aaPredicted RBP13.77□□□□□ -0.21
PLXNB3-209ENST00000538966 GXYLT1Q4G148 440 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms