RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 FGL2Q14314 439 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 EMC2Q15006 297 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 OR4F3Q6IEY1 312 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 TRNP1Q6NT89 227 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 ADGRF3Q8IZF5 1079 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 UBE2J2Q8N2K1 259 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 SPATA6LQ8N4H0 392 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 UXS1Q8NBZ7 420 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 ZBED6CLQ96FA7 236 aaPredicted RBP12.05□□□□□ -0.48
USP3-203ENST00000538686 PPM1MQ96MI6 270 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 SLC38A2Q96QD8 506 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 OR5M11Q96RB7 305 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 MSTO1Q9BUK6 570 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 DNTTIP1Q9H147 329 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 OR51M1Q9H341 326 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 SLC28A3Q9HAS3 691 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 MID1IP1Q9NPA3 183 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 GKN1Q9NS71 199 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 DUX4Q9UBX2 424 aa12.05□□□□□ -0.48
USP3-203ENST00000538686 NDRG2Q9UN36 371 aaKnown RBP12.05□□□□□ -0.48
USP3-203ENST00000538686 A0A1W2PQL4 384 aaPredicted RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 PMS2P1A4D2B8 440 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 M0QYV0 167 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SOX30O94993 753 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SFTPCP11686 197 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 NMBRP28336 390 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SFNP31947 248 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SDC2P34741 201 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 ASPAP45381 313 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 PLK1P53350 603 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 UFM1P61960 85 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 AP5B1Q2VPB7 878 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 MANEALQ5VSG8 457 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 KCTD11Q693B1 232 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 ELP2Q6IA86 826 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 TAS1R3Q7RTX0 852 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 ZNF605Q86T29 641 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 CCDC71Q8IV32 467 aaPredicted RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 ZDHHC21Q8IVQ6 265 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 Q8N402 240 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 DENND6BQ8NEG7 585 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 GTF3C2Q8WUA4 911 aaPredicted RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 ZDHHC12Q96GR4 267 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 ZNF285Q96NJ3 590 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 OR2M2Q96R28 347 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 KCNJ15Q99712 375 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 RBCK1Q9BYM8 510 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 MIXL1Q9H2W2 232 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 QTRT2Q9H974 415 aaKnown RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 CDHR5Q9HBB8 845 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 EXOSC4Q9NPD3 245 aaKnown RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 PRDM9Q9NQV7 894 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SNTG1Q9NSN8 517 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 CNOT2Q9NZN8 540 aaKnown RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 SH3BP4Q9P0V3 963 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SCP2D1Q9UJQ7 156 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 PCDHGA6Q9Y5G7 932 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 C2orf74A8MZ97 194 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 PDCD5O14737 125 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SCAMP3O14828 347 aaKnown RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 GREM1O60565 184 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 PLOD3O60568 738 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 CRCPO75575 148 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 CST3P01034 146 aaPredicted RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 SCG5P05408 212 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 HMBSP08397 361 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 STSP08842 583 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 PTPRAP18433 802 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 PAMP19021 973 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 DNASE1P24855 282 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 GGT2P36268 569 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 MAN2A2P49641 1150 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SNX16P57768 344 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 PPP1R8Q12972 351 aaKnown RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 GPR17Q13304 367 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SLC14A2Q15849 920 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SNAPC1Q16533 368 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 DUOXA2Q1HG44 320 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 CERCAMQ5T4B2 595 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 ALG1LQ6GMV1 187 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 NAPEPLDQ6IQ20 393 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 NKAIN4Q8IVV8 208 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 CCDC117Q8IWD4 279 aaPredicted RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 FAM126BQ8IXS8 530 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 TBC1D19Q8N5T2 526 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 OR11H4Q8NGC9 324 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 CELF6Q96J87 481 aaKnown RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 TMEM43Q9BTV4 400 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 DPH7Q9BTV6 452 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 MED18Q9BUE0 208 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 SIK2Q9H0K1 926 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 HECAQ9UBI9 543 aaPredicted RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 GIMAP2Q9UG22 337 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
USP3-203ENST00000538686 MYO18AQ92614 2054 aaKnown RBP12.04□□□□□ -0.48
USP3-203ENST00000538686 FZD9O00144 591 aa12.03□□□□□ -0.48
USP3-203ENST00000538686 DHX15O43143 795 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms