RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 AMZ2Q86W34 360 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 SLC26A11Q86WA9 606 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 GKN2Q86XP6 184 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 DENND6AQ8IWF6 608 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 DCLK2Q8N568 766 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CLDN19Q8N6F1 224 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 GBP7Q8N8V2 638 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CCDC63Q8NA47 563 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 FAM46DQ8NEK8 389 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 GPR150Q8NGU9 434 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 LMX1AQ8TE12 382 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 SETD7Q8WTS6 366 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 SKA2Q8WVK7 121 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CCT6BQ92526 530 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 TMEM159Q96B96 161 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 FAM122AQ96E09 287 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 SGF29Q96ES7 293 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 RSRC1Q96IZ7 334 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CYTH2Q99418 400 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CPNE1Q99829 537 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 WDR83Q9BRX9 315 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 TIMM29Q9BSF4 260 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 LRRC61Q9BV99 259 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 TMEM109Q9BVC6 243 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 TXLNGYQ9BZA5 131 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CDC42EP4Q9H3Q1 356 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 DPEP2Q9H4A9 486 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 STN1Q9H668 368 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CCDC134Q9H6E4 229 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 SARS2Q9NP81 518 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 IARS2Q9NSE4 1012 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 TRNAU1APQ9NX07 287 aaKnown RBP4.2□□□□□ -1.74
SNHG1-208ENST00000538266 NLGN3Q9NZ94 848 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 NCKIPSDQ9NZQ3 722 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 SCOCQ9UIL1 159 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 FBXO5Q9UKT4 447 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 SLC12A4Q9UP95 1085 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 GPR34Q9UPC5 381 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 DNAJC16Q9Y2G8 782 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CRYL1Q9Y2S2 319 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 PCDHB1Q9Y5F3 818 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 COMMD10Q9Y6G5 202 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 CSNK1G3Q9Y6M4 447 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 PCDH15Q96QU1 1955 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 MUC6Q6W4X9 2439 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 TMEM131Q92545 1883 aa4.2□□□□□ -1.74
SNHG1-208ENST00000538266 GON4LQ3T8J9 2241 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 PI4KAP42356 2102 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 LRP4O75096 1905 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 ADAMTS9Q9P2N4 1935 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 PLXNB3Q9ULL4 1909 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 TRIOO75962 3097 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 EXOC1LA0A1B0GW35 172 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 MGAT4DA6NG13 374 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 C4orf47A7E2U8 309 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 B4DGG1 531 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 IFRD1O00458 451 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 TPP1O14773 563 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 LIN7AO14910 233 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 MGRN1O60291 552 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 SNX2O60749 519 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 KCNJ13O60928 360 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 VPS26AO75436 327 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 ITGA10O75578 1167 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 POP7O75817 140 aaKnown RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 TRIM16O95361 564 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 INHBAP08476 426 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 VIMP08670 466 aaKnown RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 ABHD2P08910 425 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 SLC35G4P0C7Q5 338 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 CHN1P15882 459 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 CHRM3P20309 590 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 IDSP22304 550 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 RPS3P23396 243 aaKnown RBP eCLIP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 DGKAP23743 735 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 AK4P27144 223 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 FMO4P31512 558 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 PLA2G5P39877 138 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 GP5P40197 560 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 HALP42357 657 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 RXRGP48443 463 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 CD151P48509 253 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 PPM1FP49593 454 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 CTSCP53634 463 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 SLC12A2P55011 1212 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 ELF3P78545 371 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 ARHGAP8P85298 464 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 MPP1Q00013 466 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 B4GALNT1Q00973 533 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 BNC1Q01954 994 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 PLOD1Q02809 727 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-208ENST00000538266 HSPA14Q0VDF9 509 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 C1orf61Q13536 156 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 RIPK1Q13546 671 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 KRT33BQ14525 404 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 SEMA3AQ14563 771 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 EFTUD2Q15029 972 aaKnown RBP eCLIP4.19□□□□□ -1.745e-23■■■■■ 44.5
SNHG1-208ENST00000538266 KLHL38Q2WGJ6 581 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 DEFB133Q30KQ1 61 aa4.19□□□□□ -1.74
SNHG1-208ENST00000538266 TTLL9Q3SXZ7 439 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms