RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	SMIM29	Q86T20	159 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	NR2C2AP	Q86WQ0	139 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	KLHDC8A	Q8IYD2	350 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	RCOR2	Q8IZ40	523 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	PRSS35	Q8N3Z0	413 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	SFRP1	Q8N474	314 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	GBP7	Q8N8V2	638 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	SMYD1	Q8NB12	490 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	SLC37A3	Q8NCC5	494 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	GPRC5A	Q8NFJ5	357 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	HPSE2	Q8WWQ2	592 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	CCDC47	Q96A33	483 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	PDLIM5	Q96HC4	596 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	RBM41	Q96IZ5	413 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	INPP4A	Q96PE3	977 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	UHRF2	Q96PU4	802 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	CDCA3	Q99618	268 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	KRTAP4-2	Q9BYR5	136 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	SLC39A8	Q9C0K1	460 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	UBQLN3	Q9H347	655 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	C10orf88	Q9H8K7	445 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	INTS10	Q9NVR2	710 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	KCNG2	Q9UJ96	466 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	MOSPD1	Q9UJG1	213 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	ICAM5	Q9UMF0	924 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	AGTPBP1	Q9UPW5	1226 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	PCDHGA1	Q9Y5H4	931 aa		4.85	□□□□□ -1.63
PRKDC-208	ENST00000536710	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710		A0A0B4J203	849 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	TRBV5-5	A0A0J9YX44	114 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	PGRMC2	O15173	223 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	PRKAR1A	P10644	381 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	MAGEA11	P43364	429 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	SERPINH1	P50454	418 aa	Known RBP	4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	ADAR	P55265	1226 aa	Known RBP	4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	CLDN17	P56750	224 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	ARHGAP1	Q07960	439 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	LASP1	Q14847	261 aa	Known RBP	4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	ACKR1	Q16570	336 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	SLC24A5	Q71RS6	500 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	PRUNE1	Q86TP1	453 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	PEX5L	Q8IYB4	626 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	RFT1	Q96AA3	541 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	GIMAP5	Q96F15	307 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	NODAL	Q96S42	347 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	KRTAP4-5	Q9BYR2	181 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	DPEP2	Q9H4A9	486 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	THAP9	Q9H5L6	903 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	SLC52A3	Q9NQ40	469 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	PROCR	Q9UNN8	238 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	C2CD2	Q9Y426	696 aa		4.84	□□□□□ -1.63
PRKDC-208	ENST00000536710	C2CD4D	B7Z1M9	353 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	CACNB4	O00305	520 aa	Predicted RBP	4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	KLF11	O14901	512 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	KCNAB3	O43448	404 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	ACSL4	O60488	711 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	CDC123	O75794	336 aa	Predicted RBP	4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	CLPTM1	O96005	669 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	IGLV2-11	P01706	119 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	GPI	P06744	558 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	YES1	P07947	543 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	HMBS	P08397	361 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	CPA3	P15088	417 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	MAP2K2	P36507	400 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	NT5C2	P49902	561 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	NR0B1	P51843	470 aa	Known RBP	4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	TRIM29	Q14134	588 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	RPS6KA1	Q15418	735 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	EXT1	Q16394	746 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	SGCB	Q16585	318 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	AARD	Q4LEZ3	155 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	XKR6	Q5GH73	641 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	ARMCX4	Q5H9R4	360 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	FGD3	Q5JSP0	725 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	OR4C11	Q6IEV9	310 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	SIGLEC15	Q6ZMC9	328 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	CNBD1	Q8NA66	436 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	TMEM178A	Q8NBL3	297 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	CTAGE1	Q96RT6	745 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	GPR173	Q9NS66	373 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	IL36A	Q9UHA7	158 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	PPP2R2C	Q9Y2T4	447 aa		4.83	□□□□□ -1.64
PRKDC-208	ENST00000536710	FAM149A	A5PLN7	773 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	ANKDD1B	A6NHY2	528 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	PMS2P5	A8MQ11	134 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710		H0YIG0	161 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	SCO2	O43819	266 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	SMS	P52788	366 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	SLC34A1	Q06495	639 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	KLHL10	Q6JEL2	608 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	TOM1L2	Q6ZVM7	507 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	C9orf106	Q8NAJ2	232 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	OR2T11	Q8NH01	316 aa		4.82	□□□□□ -1.64
PRKDC-208	ENST00000536710	BCL2L2	Q92843	193 aa	Predicted RBP	4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms