RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SMURF2Q9HAU4 748 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 NEUROD4Q9HD90 331 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 ING4Q9UNL4 249 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 OARD1Q9Y530 152 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 CAMKVQ8NCB2 501 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 C3orf58Q8NDZ4 430 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 OR52B6Q8NGF0 335 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 RELTQ969Z4 430 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 ING3Q9NXR8 418 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 DFNA5O60443 496 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 CCNKO75909 580 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 UBXN7O94888 489 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 PRAMEF12O95522 483 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 ZNF630Q2M218 657 aaPredicted RBP17.02■□□□□ 0.31
PHRF1-205ENST00000533464 CLLU1OSQ5K130 101 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 BICRALQ6AI39 1079 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 ABHD13Q7L211 337 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 APCDD1Q8J025 514 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 KRTCAP2Q8N6L1 136 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 COMMD9Q9P000 198 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 DNAJC15Q9Y5T4 150 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 PAK4O96013 591 aaPredicted RBP17.02■□□□□ 0.31
PHRF1-205ENST00000533464 PRSS56P0CW18 603 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 SCN1BQ07699 218 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 AMZ1Q400G9 498 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 ISCA2Q86U28 154 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 RAD9AQ99638 391 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 BTBD1Q9H0C5 482 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 KCNN2Q9H2S1 579 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 TRIM39Q9HCM9 518 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 RIMKLBQ9ULI2 386 aa17.02■□□□□ 0.31
PHRF1-205ENST00000533464 B4DGG1 531 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 H7BY64 318 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 KIAA1161Q6NSJ0 714 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 RAB43Q86YS6 212 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 TSTD1Q8NFU3 115 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 UFD1Q92890 307 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 PRAP1Q96NZ9 151 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 PDCD10Q9BUL8 212 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 TOR3AQ9H497 397 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 CKLFQ9UBR5 152 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 COPS7AQ9UBW8 275 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 SPIN1Q9Y657 262 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-205ENST00000533464 IL12BP29460 328 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 TOR1AIP1Q5JTV8 583 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 ERI1Q8IV48 349 aaKnown RBP17.01■□□□□ 0.31
PHRF1-205ENST00000533464 SLC15A3Q8IY34 581 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 NENFQ9UMX5 172 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 PCDHB11Q9Y5F2 797 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
PHRF1-205ENST00000533464 MYH3P11055 1940 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 TLR4O00206 839 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 FESP07332 822 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 C8orf89P0DMQ9 161 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 MASP1P48740 699 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 ARSFP54793 590 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 PPP2R2BQ00005 443 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 MEP1AQ16819 746 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 C5orf22Q49AR2 442 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 SORCS1Q8WY21 1168 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 AIG1Q9NVV5 245 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 ZBTB42B2RXF5 422 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 TMEM150CB9EJG8 249 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 BCKDHAP12694 445 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 AFF1P51825 1210 aaKnown RBP17.01■□□□□ 0.31
PHRF1-205ENST00000533464 CYBRD1Q53TN4 286 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 ADGRG6Q86SQ4 1221 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 RNF130Q86XS8 419 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 TRNT1Q96Q11 434 aaKnown RBP17.01■□□□□ 0.31
PHRF1-205ENST00000533464 GINS4Q9BRT9 223 aa17.01■□□□□ 0.31
PHRF1-205ENST00000533464 PDYNP01213 254 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 ETV4P43268 484 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 SH3BP2P78314 561 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 BNIP3Q12983 259 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 ABRAXAS2Q15018 415 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 ERN2Q76MJ5 926 aaKnown RBP17■□□□□ 0.31
PHRF1-205ENST00000533464 TMEM174Q8WUU8 243 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 TSEN15Q8WW01 171 aaKnown RBP17■□□□□ 0.31
PHRF1-205ENST00000533464 NARS2Q96I59 477 aaKnown RBP17■□□□□ 0.31
PHRF1-205ENST00000533464 DAPL1A0PJW8 107 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 GSRP00390 522 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 CSTF2P33240 577 aaKnown RBP eCLIP17■□□□□ 0.31
PHRF1-205ENST00000533464 ZNF789Q5FWF6 425 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 NCEH1Q6PIU2 408 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 USP43Q70EL4 1123 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 C12orf76Q8N812 135 aaPredicted RBP17■□□□□ 0.31
PHRF1-205ENST00000533464 PXYLP1Q8TE99 480 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 SLC22A1O15245 554 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 TBX1O43435 398 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 RLN1P04808 185 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 AHCYP23526 432 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 CBX3Q13185 183 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 LIPJQ5W064 366 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 TBX5Q99593 518 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 TRPV5Q9NQA5 729 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 ACTL7AQ9Y615 435 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 G3V2L1 256 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 AURKAO14965 403 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 KLHL18O94889 574 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms