RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ZNF662Q6ZS27 426 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 APTXQ7Z2E3 356 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 LAPTM4BQ86VI4 370 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 UNC93AQ86WB7 457 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TTLQ8NG68 377 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ZFP90Q8TF47 636 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SGCDQ92629 289 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ASB2Q96Q27 587 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 WDR77Q9BQA1 342 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 IL22Q9GZX6 179 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF700Q9H0M5 742 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC6A17Q9H1V8 727 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TMEM134Q9H6X4 195 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TBC1D17Q9HA65 648 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 FBRSL1Q9HCM7 1045 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RPS6KA6Q9UK32 745 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ADAM28Q9UKQ2 775 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 BTRCQ9Y297 605 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SMIM30A4D0T7 59 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 F5H0A9 414 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 GRM6O15303 877 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MITFO75030 526 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 LRATO95237 230 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 BPGMP07738 259 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 KDELR1P24390 212 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 HOXC12P31275 282 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 GABRB2P47870 512 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 NDST2P52849 883 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 NDUFA6P56556 154 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RPL19P84098 196 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 B3GNT9Q6UX72 402 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF567Q8N184 647 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM98AQ8NCA5 519 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 NELL1Q92832 810 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 HOPXQ9BPY8 73 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 KCNMB3Q9NPA1 279 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 IL37Q9NZH6 218 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MGAT4CQ9UBM8 478 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RAP2CQ9Y3L5 183 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RPS10-NUDT3A0A1W2PQS6 291 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 A0A1W2PRQ8 180 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MEIOCA2RUB1 952 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 QSOX1O00391 747 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MAGEB4O15481 346 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 FFAR2O15552 330 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC28A2O43868 658 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SCAF4O95104 1147 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MATN4O95460 622 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 VIPP01282 170 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 GPIP06744 558 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RPL17P18621 184 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 GJA5P36382 358 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RPS10P46783 165 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 NAGLUP54802 743 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RPL38P63173 70 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TSTQ16762 297 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 Q5PR19 223 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 OR2L2Q8NH16 312 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.78□□□□□ -1.321e-8■■□□□ 13.4
TGFBR3-210ENST00000533089 ZNF384Q8TF68 577 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 LMLNQ96KR4 655 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 CST11Q9H112 138 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 UNC93B1Q9H1C4 597 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 EQTNQ9NQ60 294 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ABCD2Q9UBJ2 740 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 EFCAB7A8K855 629 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SULT1C2O00338 296 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ADH7P40394 386 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ALDH3B1P43353 468 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 RPS3AP61247 264 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ATP6V0D1P61421 351 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PTPRNQ16849 979 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 LRRC37A5PQ49AS3 106 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 C14orf28Q4W4Y0 310 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TANGO2Q6ICL3 276 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 WASH2PQ6VEQ5 465 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 C17orf107Q6ZR85 190 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 USP30Q70CQ3 517 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PGAP1Q75T13 922 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PIGZQ86VD9 579 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM129CQ86XR2 697 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PACRGLQ8N7B6 248 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 BEST4Q8NFU0 473 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 OR4A15Q8NGL6 344 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ADAMTS14Q8WXS8 1223 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 DPF1Q92782 380 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 KAT5Q92993 513 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 C5orf34Q96MH7 638 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SMURF1Q9HCE7 757 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 DEC1Q9P2X7 70 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF282Q9UDV7 671 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MRPS33Q9Y291 106 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 GPR25O00155 361 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 HMGB3O15347 200 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 SEPT4O43236 478 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 PAPSS1O43252 624 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 CCNB2O95067 398 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms