RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TUBB6Q9BUF5 446 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 PARVBQ9HBI1 364 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 ASIC3Q9UHC3 531 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 DNALI1O14645 258 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-207ENST00000531727 SLC16A5O15375 505 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 LRRTM2O43300 516 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 JRKO75564 520 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 CYC1P08574 325 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 ITGAMP11215 1152 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 CCND1P24385 295 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 GABRB3P28472 473 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 PER3P56645 1201 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 DHX9Q08211 1270 aaKnown RBP15.92■□□□□ 0.14
CPSF1-207ENST00000531727 INAQ16352 499 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 RBM20Q5T481 1227 aaKnown RBP15.92■□□□□ 0.14
CPSF1-207ENST00000531727 TMEM214Q6NUQ4 689 aaKnown RBP15.92■□□□□ 0.14
CPSF1-207ENST00000531727 PAQR3Q6TCH7 311 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 MBOAT1Q6ZNC8 495 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 KIAA0408Q6ZU52 694 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 PRSS41Q7RTY9 318 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 PCGF5Q86SE9 256 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 LURAP1LQ8IV03 231 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 CNTN4Q8IWV2 1026 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 MYO1HQ8N1T3 1032 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 CAMKVQ8NCB2 501 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 METTL21AQ8WXB1 218 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 TM4SF19Q96DZ7 209 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 MAGEB10Q96LZ2 347 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-207ENST00000531727 MACROD1Q9BQ69 325 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 NAT9Q9BTE0 207 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 SGPP1Q9BX95 441 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 VN1R1Q9GZP7 353 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 RNF32Q9H0A6 362 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 OLAHQ9NV23 265 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 SNX12Q9UMY4 172 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 SH2B3Q9UQQ2 575 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 TEX15Q9BXT5 2789 aa15.92■□□□□ 0.14
CPSF1-207ENST00000531727 UNC79Q9P2D8 2635 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 BANF1O75531 89 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 AHSGP02765 367 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 IL1RNP18510 177 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 DCTP40126 519 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 BCL6P41182 706 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 CDKN2DP55273 166 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 NAE1Q13564 534 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 MINDY4Q4G0A6 757 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 MFSD4BQ5TF39 518 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 ZNF324BQ6AW86 544 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-207ENST00000531727 ZNF787Q6DD87 383 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 HIBCHQ6NVY1 386 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-207ENST00000531727 LCTLQ6UWM7 567 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 SLCO2A1Q92959 643 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 LINGO1Q96FE5 620 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 CYTH2Q99418 400 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 FAM129AQ9BZQ8 928 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.91■□□□□ 0.14
CPSF1-207ENST00000531727 DDX47Q9H0S4 455 aaKnown RBP15.91■□□□□ 0.14
CPSF1-207ENST00000531727 ATG10Q9H0Y0 220 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 ANKHQ9HCJ1 492 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 HCN3Q9P1Z3 774 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 DOPEY1Q5JWR5 2465 aa15.91■□□□□ 0.14
CPSF1-207ENST00000531727 FEZF1A0PJY2 475 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 SGK494L7N484 410 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 LCMT2O60294 686 aaKnown RBP15.9■□□□□ 0.14
CPSF1-207ENST00000531727 WDPCPO95876 746 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 F10P00742 488 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 HIST1H2AGP0C0S8 130 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-207ENST00000531727 CDH1P12830 882 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 HIST1H2ADP20671 130 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 GRK3P35626 688 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 XCR1P46094 333 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 TDGF1P3P51864 188 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 PHKG1Q16816 387 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 MSS51Q4VC12 460 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 ABHD17BQ5VST6 288 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 LANCL3Q6ZV70 420 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 CPEB2Q7Z5Q1 589 aaKnown RBP15.9■□□□□ 0.14
CPSF1-207ENST00000531727 GALNT7Q86SF2 657 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 ASPGQ86U10 573 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 SHISA5Q8N114 240 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 AMER2Q8N7J2 671 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 KCT2Q8NC54 265 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 OR51Q1Q8NH59 317 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 ZCCHC10Q8TBK6 192 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 ALKBH8Q96BT7 664 aaKnown RBP15.9■□□□□ 0.14
CPSF1-207ENST00000531727 CERS2Q96G23 380 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 HIST1H2AHQ96KK5 128 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 TAAR6Q96RI8 345 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 HIST1H2AJQ99878 128 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 HAUS8Q9BT25 410 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 H2AFJQ9BTM1 129 aa15.9■□□□□ 0.14
CPSF1-207ENST00000531727 C19orf25Q9UFG5 118 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-207ENST00000531727 CROCCQ5TZA2 2017 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 OR5H15A6NDH6 313 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 ZSCAN12O43309 604 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 SEC24DO94855 1032 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-207ENST00000531727 TSPAN12O95859 305 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 STSP08842 583 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 NPPBP16860 134 aa15.89■□□□□ 0.13
CPSF1-207ENST00000531727 AGTR2P50052 363 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms