RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 LMNTD1Q8N9Z9 388 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 ATL1Q8WXF7 558 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 MTERF3Q96E29 417 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 SLC35A5Q9BS91 424 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 OR51B5Q9H339 312 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 ABCB9Q9NP78 766 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 ERVK13-1Q9NX77 482 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 SIP14410 1827 aa10.97□□□□□ -0.65
NXF1-211ENST00000531709 KLK8O60259 260 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 TMCC2O75069 709 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 SULT1C4O75897 302 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 WISP3O95389 354 aaPredicted RBP10.96□□□□□ -0.65
NXF1-211ENST00000531709 CYBAP13498 195 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 ETFAP13804 333 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 HOXD12P35452 270 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 MGAT3Q09327 533 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 CNTN1Q12860 1018 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 DPY19L1Q2PZI1 675 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 GCNT6Q5T4J0 391 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 NPAS4Q8IUM7 802 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 NAGSQ8N159 534 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 OR6Q1Q8NGQ2 317 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 FATE1Q969F0 183 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 CCDC115Q96NT0 180 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 CPPED1Q9BRF8 314 aaPredicted RBP10.96□□□□□ -0.65
NXF1-211ENST00000531709 NLNQ9BYT8 704 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 OR51E2Q9H255 320 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 SPG21Q9NZD8 308 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 KNL1Q8NG31 2342 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 TLL1O43897 1013 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 LZTS3O60299 673 aaPredicted RBP10.96□□□□□ -0.65
NXF1-211ENST00000531709 DNAJB5O75953 348 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 ATP1B2P14415 290 aaPredicted RBP10.96□□□□□ -0.65
NXF1-211ENST00000531709 HOXB6P17509 224 aaKnown RBP10.96□□□□□ -0.65
NXF1-211ENST00000531709 NR4A2P43354 598 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 OLR1P78380 273 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 SCARB2Q14108 478 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 TPRG1Q6ZUI0 275 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 PRSS48Q7RTY5 328 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 FAM217AQ8IXS0 508 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 CFAP206Q8IYR0 622 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 DCAF4L2Q8NA75 395 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 MYLIPQ8WY64 445 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 POP5Q969H6 163 aaKnown RBP10.96□□□□□ -0.65
NXF1-211ENST00000531709 SLC22A12Q96S37 553 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 DOK1Q99704 481 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 NTMT1Q9BV86 223 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 C1QTNF3Q9BXJ4 246 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 EHD1Q9H4M9 534 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 RMI1Q9H9A7 625 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 B4GALT6Q9UBX8 382 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 SLCO3A1Q9UIG8 710 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 CORO2BQ9UQ03 480 aa10.96□□□□□ -0.65
NXF1-211ENST00000531709 PARP14Q460N5 1801 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 CKMT1AP12532 417 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 CR2P20023 1033 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 ASMTP46597 345 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 RPS13P62277 151 aaKnown RBP10.96□□□□□ -0.66
NXF1-211ENST00000531709 AGTRAPQ6RW13 159 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 CCBE1Q6UXH8 406 aaPredicted RBP10.96□□□□□ -0.66
NXF1-211ENST00000531709 NPAS3Q8IXF0 933 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 FOXJ1Q92949 421 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 CNDP2Q96KP4 475 aaKnown RBP10.96□□□□□ -0.66
NXF1-211ENST00000531709 P2RY13Q9BPV8 354 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 WRAP53Q9BUR4 548 aaKnown RBP10.96□□□□□ -0.66
NXF1-211ENST00000531709 POU2F3Q9UKI9 436 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 ITGB1BP2Q9UKP3 347 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 KLHL20Q9Y2M5 609 aa10.96□□□□□ -0.66
NXF1-211ENST00000531709 MYO10Q9HD67 2058 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 OXSR1O95747 527 aaPredicted RBP10.95□□□□□ -0.66
NXF1-211ENST00000531709 C6orf47O95873 294 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 PPIBP23284 216 aaKnown RBP10.95□□□□□ -0.66
NXF1-211ENST00000531709 ST8SIA6P61647 398 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 PHC1P78364 1004 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 PPIGQ13427 754 aaKnown RBP eCLIP10.95□□□□□ -0.667e-8■■■□□ 15.6
NXF1-211ENST00000531709 DOC2AQ14183 400 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 MSRB3Q8IXL7 192 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 C10orf111Q8N326 155 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 OR9Q2Q8NGE9 314 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 ZNF461Q8TAF7 563 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 WFDC5Q8TCV5 224 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 PDLIM5Q96HC4 596 aaKnown RBP10.95□□□□□ -0.66
NXF1-211ENST00000531709 MMP27Q9H306 513 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 TRIM39Q9HCM9 518 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 SLC52A3Q9NQ40 469 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 LHX3Q9UBR4 397 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 TMED5Q9Y3A6 229 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 PEX16Q9Y5Y5 336 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 CENPXA8MT69 81 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 H3BM21 787 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 AQP9O43315 295 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 SNX4O95219 450 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 HOXD10P28358 340 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 HNMTP50135 292 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 GSTM4Q03013 218 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 SLC14A1Q13336 389 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 CTF1Q16619 201 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 CRTC1Q6UUV9 634 aa10.95□□□□□ -0.66
NXF1-211ENST00000531709 BBS7Q8IWZ6 715 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms