RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 NDUFA13Q9P0J0 144 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 ZNF639Q9UID6 485 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 TDRKHQ9Y2W6 561 aaKnown RBP14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 PCDHB11Q9Y5F2 797 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 HEBP2Q9Y5Z4 205 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3DA0A087WVF3 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3IA0A087WXS9 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3EA0A087X179 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3KA0A087X1G2 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 GNG14A0A1W2PPG7 69 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 C7orf72A4D263 438 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3FA6NER0 549 aaPredicted RBP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 ANKDD1BA6NHY2 528 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 GABRR3A8MPY1 467 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3LB9A6J9 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 CLIC1O00299 241 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 ABCB1P08183 1280 aaPredicted RBP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3HP0C7X1 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 GSTM2P28161 218 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 CCR8P51685 355 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 ADPRHP54922 357 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 KIAA1024LP59773 190 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 FGL2Q14314 439 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 COL19A1Q14993 1142 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 NRF1Q16656 503 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 CPZQ66K79 652 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3GQ6DHY5 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3CQ6IPX1 549 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TDHQ8IZJ6 230 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TBC1D3Q8IZP1 549 aaPredicted RBP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 TTLQ8NG68 377 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 OR7A2PQ8NGA2 310 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 SH3KBP1Q96B97 665 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 SIPA1Q96FS4 1042 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 MYCBPQ99417 103 aaPredicted RBP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 SLC29A1Q99808 456 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 CENPKQ9BS16 269 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 INPP5KQ9BT40 448 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 APOOQ9BUR5 198 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 MKRN2Q9H000 416 aaKnown RBP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 BTBD1Q9H0C5 482 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 CXorf56Q9H5V9 222 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 ZNF696Q9H7X3 374 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 ZNF282Q9UDV7 671 aaPredicted RBP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 SERGEFQ9UGK8 458 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 LIMD1Q9UGP4 676 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 PCDHGB4Q9UN71 923 aa14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 SAMD4AQ9UPU9 718 aaKnown RBP14.21□□□□□ -0.13
ECHDC1-220ENST00000528402 A0A1W2PQF6 199 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 ANTXRLA6NF34 631 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 TOR1BO14657 336 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 ETHE1O95571 254 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 KLF8O95600 359 aaPredicted RBP14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 CEACAM5P06731 702 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 CKMT2P17540 419 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 CLCNKAP51800 687 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 DLX2Q07687 328 aaPredicted RBP14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 VEZF1Q14119 521 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 PYCR3Q53H96 274 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 NHSL2Q5HYW2 709 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 EOGTQ5NDL2 527 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 KIAA1211LQ6NV74 962 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 ZNF621Q6ZSS3 439 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 CHST15Q7LFX5 561 aaPredicted RBP14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 PAGE2Q7Z2X7 111 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 COMMD6Q7Z4G1 85 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 SVOPLQ8N434 492 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 RNF175Q8N4F7 328 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 CBR4Q8N4T8 237 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 TRIML2Q8N7C3 387 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 SMRP1Q8NCR6 262 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 OR4K1Q8NGD4 311 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 GOT1L1Q8NHS2 421 aaPredicted RBP14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 TFAP2CQ92754 450 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 EZH1Q92800 747 aaPredicted RBP14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 MIEF2Q96C03 454 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 RDH12Q96NR8 316 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 TRAPPC9Q96Q05 1148 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 FERD3LQ96RJ6 166 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 SEPHS2Q99611 448 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 ANKRD60Q9BZ19 345 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 RAD21L1Q9H4I0 556 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 DNAJB9Q9UBS3 223 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 CIDEBQ9UHD4 219 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 RPS6KA6Q9UK32 745 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 VPS4AQ9UN37 437 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 PRKAB1Q9Y478 270 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 OR1A2Q9Y585 309 aa14.2□□□□□ -0.14
ECHDC1-220ENST00000528402 PRR19A6NJB7 356 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 SAC3D1A6NKF1 404 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 SOCS2O14508 198 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 TBX19O60806 448 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 LAMP1P11279 417 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 ACADMP11310 421 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 ENGP17813 658 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 NDUFS1P28331 727 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 LTBRP36941 435 aa14.19□□□□□ -0.14
ECHDC1-220ENST00000528402 ABATP80404 500 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms