RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SYTL1Q8IYJ3 562 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 CFAP206Q8IYR0 622 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 CLECL1Q8IZS7 167 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 OR13F1Q8NGS4 319 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 OR9A1PQ8NGU1 263 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 SH3KBP1Q96B97 665 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 ASPSCR1Q9BZE9 553 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 DPEP2Q9H4A9 486 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 CDC14AQ9UNH5 594 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 GPR34Q9UPC5 381 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 C1orf226A1L170 272 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 RNASET2O00584 256 aaKnown RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 NFATC1O95644 943 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 NPPBP16860 134 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 IDSP22304 550 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 GPR1P46091 355 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 CTBSQ01459 385 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 ELAVL3Q14576 367 aaKnown RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 HIST2H2ACQ16777 129 aaPredicted RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 FNDC3BQ53EP0 1204 aaKnown RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 C9orf64Q5T6V5 341 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 ZNF697Q5TEC3 545 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 HIST2H2AA3Q6FI13 130 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 R3HCC1LQ7Z5L2 792 aaKnown RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 TMPRSS11BQ86T26 416 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 TRAPPC5Q8IUR0 188 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 CDC26Q8NHZ8 85 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 ARRDC3Q96B67 414 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 BHLHE41Q9C0J9 482 aaPredicted RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 CHST8Q9H2A9 424 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 ADNPQ9H2P0 1102 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 LIN28AQ9H9Z2 209 aaKnown RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 ZNF282Q9UDV7 671 aaPredicted RBP14.8□□□□□ -0.04
USH1C-207ENST00000527720 ATP6V1HQ9UI12 483 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 BAG5Q9UL15 447 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 ERVK-11Q9UQG0 969 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 BTBD3Q9Y2F9 522 aa14.8□□□□□ -0.04
USH1C-207ENST00000527720 PRRT4C9JH25 899 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 H3BMQ9 156 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 YY2O15391 372 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 PCDH7O60245 1069 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 NOL3O60936 208 aaKnown RBP14.79□□□□□ -0.04
USH1C-207ENST00000527720 UGT2B11O75310 529 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 SEC14L2O76054 403 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 C1GALT1C1LP0DN25 315 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 DNAJA1P31689 397 aaKnown RBP14.79□□□□□ -0.04
USH1C-207ENST00000527720 RPL3P39023 403 aaKnown RBP14.79□□□□□ -0.04
USH1C-207ENST00000527720 TMBIM6P55061 237 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 ISL1P61371 349 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 RPS13P62277 151 aaKnown RBP14.79□□□□□ -0.04
USH1C-207ENST00000527720 DCTN2Q13561 401 aaKnown RBP14.79□□□□□ -0.04
USH1C-207ENST00000527720 NEDD8Q15843 81 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 TMEM52BQ4KMG9 183 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 RAET1GQ6H3X3 334 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 SETD9Q8NE22 299 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 FBLIM1Q8WUP2 373 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 ZNF566Q969W8 418 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 NXPE3Q969Y0 559 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 COG8Q96MW5 612 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 OR2AG1Q9H205 316 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 VPS4AQ9UN37 437 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 COQ6Q9Y2Z9 468 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 TSC22D4Q9Y3Q8 395 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 HSPE1-MOB4S4R3N1 261 aa14.79□□□□□ -0.04
USH1C-207ENST00000527720 GNG14A0A1W2PPG7 69 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 LINC01553A4QN01 128 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 VEGFDO43915 354 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 DNAJB5O75953 348 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 RB1P06400 928 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 C6P13671 934 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 ADRB3P13945 408 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 FPR1P21462 350 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 PRKACGP22612 351 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 IGFBP5P24593 272 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 RXRGP48443 463 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 CD47Q08722 323 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 ZNF763Q0D2J5 394 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 TEAD4Q15561 434 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 HKDC1Q2TB90 917 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 GPR107Q5VW38 600 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 PDE12Q6L8Q7 609 aaKnown RBP14.78□□□□□ -0.04
USH1C-207ENST00000527720 PIK3C3Q8NEB9 887 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 GOT1L1Q8NHS2 421 aaPredicted RBP14.78□□□□□ -0.04
USH1C-207ENST00000527720 ZFP90Q8TF47 636 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 SETD7Q8WTS6 366 aaKnown RBP14.78□□□□□ -0.04
USH1C-207ENST00000527720 GAB3Q8WWW8 586 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 SNX19Q92543 992 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 BADQ92934 168 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 ATAD3AQ9NVI7 634 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 FZD4Q9ULV1 537 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 ABCG2Q9UNQ0 655 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 U3KQV3 271 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 C2orf16Q68DN1 1984 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 B4GAT1O43505 415 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 PAPLNO95428 1278 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 CCDC159P0C7I6 412 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 POLR2IP36954 125 aaKnown RBP14.78□□□□□ -0.04
USH1C-207ENST00000527720 XAF1Q6GPH4 301 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 UNC5DQ6UXZ4 953 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 CHST15Q7LFX5 561 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms