RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TTC34A8MYJ7 566 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MCIDASD6RGH6 385 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 HAS3O00219 553 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 FOXE1O00358 373 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 ABCD4O14678 606 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 KLF11O14901 512 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 INPPL1O15357 1258 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SPRY2O43597 315 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 LCMT2O60294 686 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 LRP3O75074 770 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ZNF217O75362 1048 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 RPS6KA4O75676 772 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 UFL1O94874 794 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ACSL3O95573 720 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 KNG1P01042 644 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 HPXP02790 462 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 LYNP07948 512 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ACAA1P09110 424 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 CDK4P11802 303 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 DPP4P27487 766 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 PIK3R1P27986 724 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 GABRA5P31644 462 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 PTGER1P34995 402 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ETV4P43268 484 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CDX1P47902 265 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 POU3F4P49335 361 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CSNK1EP49674 416 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 AGTR2P50052 363 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CCT8P50990 548 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 DAOAP59103 153 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 BPIFB4P59827 614 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ADAM8P78325 824 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SIM1P81133 766 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 CCZ1BP86790 482 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CCZ1P86791 482 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 CHRNEQ04844 493 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 PPIDQ08752 370 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 SREBF2Q12772 1141 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MERTKQ12866 999 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 TOP3AQ13472 1001 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 USF2Q15853 346 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 ME3Q16798 604 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 TATDN3Q17R31 274 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MSMPQ1L6U9 139 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 TCTN1Q2MV58 587 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 POM121L1PQ3SYA9 428 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SMUG1Q53HV7 270 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 RABL3Q5HYI8 236 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MLIPQ5VWP3 458 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 PLCXD3Q63HM9 321 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SPECC1LQ69YQ0 1117 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ASPHD2Q6ICH7 369 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SLC25A25Q6KCM7 469 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 TTC27Q6P3X3 843 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CBLN3Q6UW01 205 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CD300LDQ6UXZ3 194 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 KYAT3Q6YP21 454 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 LARP4Q71RC2 724 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD44-213ENST00000525209 EIF3MQ7L2H7 374 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 LINC00523Q86TU6 105 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 STHQ8IWL8 128 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 LAS2Q8IYD9 372 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 FNDC5Q8NAU1 212 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 OR13F1Q8NGS4 319 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ZNF461Q8TAF7 563 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 WDR20Q8TBZ3 569 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ATG4AQ8WYN0 398 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 KIFAP3Q92845 792 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 RAB1CQ92928 201 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 TOP1MTQ969P6 601 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 RSPRY1Q96DX4 576 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MARS2Q96GW9 593 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 RBM41Q96IZ5 413 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 SLITRK1Q96PX8 696 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ALS2CR12Q96Q35 445 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SIN3AQ96ST3 1273 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 DDOQ99489 341 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MTERF1Q99551 399 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 C17orf62Q9BQA9 187 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CHRDL1Q9BU40 450 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ANKRD60Q9BZ19 345 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 HDHD2Q9H0R4 259 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ADAMTS10Q9H324 1103 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 LRRC4Q9HBW1 653 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SGK2Q9HBY8 427 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 LRRC4CQ9HCJ2 640 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MRPL47Q9HD33 250 aaKnown RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 Q9N2J8 555 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 MYNNQ9NPC7 610 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ARL15Q9NXU5 204 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 GRHL1Q9NZI5 618 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 SEC14L3Q9UDX4 400 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 CCNL1Q9UK58 526 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 AMFRQ9UKV5 643 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 STAP1Q9ULZ2 295 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 ATP10AO60312 1499 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 FHOD3Q2V2M9 1422 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms