RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ANKRD34CP0C6C1 535 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 C8orf89P0DMQ9 161 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 CEACAM1P13688 526 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 RPL35AP18077 110 aaKnown RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 CYP2A7P20853 494 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 TIA1P31483 386 aaKnown RBP eCLIP3.48□□□□□ -1.852e-8■■■■□ 23.8
SKP1-212ENST00000523966 KCNJ1P48048 391 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 STX1BP61266 288 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 ABRQ12979 859 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 ITGA9Q13797 1035 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 RCN2Q14257 317 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 PTPN14Q15678 1187 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 ZNF74Q16587 644 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 TYSND1Q2T9J0 566 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 GPR33Q49SQ1 333 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 FAM53AQ6NSI3 398 aaPredicted RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 IYDQ6PHW0 289 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 MEX3BQ6ZN04 569 aaKnown RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 USP43Q70EL4 1123 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 SLC24A5Q71RS6 500 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 CHMP1BQ7LBR1 199 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 PIWIL3Q7Z3Z3 882 aaKnown RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 PRUNE1Q86TP1 453 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 HOGA1Q86XE5 327 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 APLFQ8IW19 511 aaPredicted RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 CCDC170Q8IYT3 715 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 APCDD1Q8J025 514 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 ZNF843Q8N446 348 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 KIAA0895Q8NCT3 520 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 OR5AP2Q8NGF4 316 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 OR10G8Q8NGN5 311 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 GMPPAQ96IJ6 420 aaPredicted RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 LRR1Q96L50 414 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 NECTIN4Q96NY8 510 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 TSSK2Q96PF2 358 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 FUT8Q9BYC5 575 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 C2orf40Q9H1Z8 148 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 VPS33BQ9H267 617 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 UBQLN3Q9H347 655 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 SRD5A3Q9H8P0 318 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 EXOC1Q9NV70 894 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 SLCO1C1Q9NYB5 712 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 PRDM4Q9UKN5 801 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 ELF5Q9UKW6 265 aaPredicted RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 LIPT1Q9Y234 373 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 NCKAP1Q9Y2A7 1128 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 MRPS28Q9Y2Q9 187 aaKnown RBP3.48□□□□□ -1.85
SKP1-212ENST00000523966 TNIKQ9UKE5 1360 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 NESP48681 1621 aa3.48□□□□□ -1.85
SKP1-212ENST00000523966 NPHP3Q7Z494 1330 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 DNMBPQ6XZF7 1577 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 C13orf42A0A1B0GVH6 325 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 LRRD1A4D1F6 860 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 A4D1N5 150 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 PRR23AA6NEV1 266 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ERVV-2B6SEH9 535 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 E5RGE8 158 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 TEX28O15482 410 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 GRID2O43424 1007 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 NADKO95544 446 aaPredicted RBP3.47□□□□□ -1.85
SKP1-212ENST00000523966 AMBPP02760 352 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 PATE4P0C8F1 98 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 F3P13726 295 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 AADACP22760 399 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 OR3A3P47888 321 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 AKAP17AQ02040 695 aaKnown RBP3.47□□□□□ -1.85
SKP1-212ENST00000523966 MORF4L2Q15014 288 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 KBTBD12Q3ZCT8 623 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 FUT11Q495W5 492 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 IQCCQ4KMZ1 466 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ZNF542PQ5EBM4 170 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ZNF789Q5FWF6 425 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 GLRA4Q5JXX5 417 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 WLSQ5T9L3 541 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 LRRC38Q5VT99 294 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ARHGAP11AQ6P4F7 1023 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 PRSS55Q6UWB4 352 aaPredicted RBP3.47□□□□□ -1.85
SKP1-212ENST00000523966 BTNL8Q6UX41 500 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 GPR141Q7Z602 305 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 CREBRFQ8IUR6 639 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 LACC1Q8IV20 430 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 GPC2Q8N158 579 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.47□□□□□ -1.85
SKP1-212ENST00000523966 MSANTD4Q8NCY6 345 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 TRIM58Q8NG06 486 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 OR6S1Q8NH40 331 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 OR1L3Q8NH93 324 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 PSMA8Q8TAA3 256 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 MAPK15Q8TD08 544 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 TMEM190Q8WZ59 177 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ZNF501Q96CX3 271 aaPredicted RBP3.47□□□□□ -1.85
SKP1-212ENST00000523966 LGALS12Q96DT0 336 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 CDKN2AIPNLQ96HQ2 116 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 C10orf90Q96M02 699 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 C17orf62Q9BQA9 187 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 WDR13Q9H1Z4 485 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ATP13A3Q9H7F0 1226 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 IL1RAPL2Q9NP60 686 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ZNF71Q9NQZ8 489 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms