RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TBC1D15Q8TC07 691 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CASKIN2Q8WXE0 1202 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CORO2AQ92828 525 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 KIAA1191Q96A73 305 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 PTCD3Q96EY7 689 aaKnown RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 LRIG1Q96JA1 1093 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF48Q96MX3 618 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 SERPINI1Q99574 410 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 NAPGQ99747 312 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 MIPEPQ99797 713 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 MAPKAP1Q9BPZ7 522 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 ECSITQ9BQ95 431 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CLSTN3Q9BQT9 956 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CNPPD1Q9BV87 410 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 PTDSS2Q9BVG9 487 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 SLC12A9Q9BXP2 914 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 RAB33BQ9H082 229 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 GANQ9H2C0 597 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 RNF39Q9H2S5 420 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 KLHL31Q9H511 634 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 Q9H521 79 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 LDAHQ9H6V9 325 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 BRF2Q9HAW0 419 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 LRRC4Q9HBW1 653 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 SNX15Q9NRS6 342 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 PNPLA3Q9NST1 481 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TREX1Q9NSU2 369 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 RIC8BQ9NVN3 520 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 SDHAF2Q9NX18 166 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 DNAJC28Q9NX36 388 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 BCAP29Q9UHQ4 241 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 TCFL5Q9UL49 500 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 RNF24Q9Y225 148 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CHKBQ9Y259 395 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 AAR2Q9Y312 384 aaKnown RBP7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CCL27Q9Y4X3 112 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 CACNA1HO95180 2353 aa7.3□□□□□ -1.24
HDAC3-216ENST00000523088 MYH15Q9Y2K3 1946 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CCDC195A0A1B0GUA6 201 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 A0A1W2PRB8 838 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 A4D1N5 150 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 BLACEA4D250 179 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 OR2AT4A6NND4 320 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 C2CD4DB7Z1M9 353 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 LRRN3E7EW58 273 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 QSOX1O00391 747 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 PTGESO14684 152 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 PHYHO14832 338 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF263O14978 683 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 SUV39H1O43463 412 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 B4GALT3O60512 393 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CTNSO60931 367 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 MED6O75586 246 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 B3GAT3O94766 335 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 UBOX5O94941 541 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 GJB6O95452 261 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ADRB1P08588 477 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 HCKP08631 526 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 THRAP10827 490 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACADMP11310 421 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 UQCRBP14927 111 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 PTNP21246 168 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 BMP6P22004 513 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 HSD11B1P28845 292 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CD40LGP29965 261 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CEACAM6P40199 344 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 DPP6P42658 865 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CDC34P49427 236 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 SRP9P49458 86 aaKnown RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CARSP49589 748 aaKnown RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 NAGLUP54802 743 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 NCKAP1LP55160 1127 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 MLLT10P55197 1068 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 AP3S2P59780 193 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACTBP60709 375 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACTA2P62736 377 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACTG1P63261 375 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACTG2P63267 376 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACTC1P68032 377 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ACTA1P68133 377 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 SPIBQ01892 262 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ASAH1Q13510 395 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TDGQ13569 410 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 PEX6Q13608 980 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 SHBQ15464 509 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TRIP13Q15645 432 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 PSMD5Q16401 504 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 AP5B1Q2VPB7 878 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 ZIK1Q3SY52 487 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 CTXN3Q4LDR2 81 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 DNLZQ5SXM8 178 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 FAM199XQ6PEV8 388 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TMIGD1Q6UXZ0 262 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 TFAP2EQ6VUC0 442 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 FAM92BQ6ZTR7 304 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 C1orf186Q6ZWK4 172 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 GDPD3Q7L5L3 318 aa7.29□□□□□ -1.24
HDAC3-216ENST00000523088 RRM2BQ7LG56 351 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms