RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 HEXBP07686 556 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 ZGLP1P0C6A0 271 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 NPPBP16860 134 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 IL1RNP18510 177 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 ITGA3P26006 1051 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 GMPRP36959 345 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 GCGRP47871 477 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 MAT1AQ00266 395 aaKnown RBP13.48□□□□□ -0.25
VEGFA-221ENST00000520265 RBBP5Q15291 538 aaKnown RBP13.48□□□□□ -0.25
VEGFA-221ENST00000520265 PPP1R3AQ16821 1122 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 SYT16Q17RD7 645 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 C18orf21Q32NC0 220 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-221ENST00000520265 FBXO48Q5FWF7 155 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 VWA2Q5GFL6 755 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 MROH9Q5TGP6 573 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 GARNL3Q5VVW2 1013 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 PPP1R32Q7Z5V6 425 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 TMEM151BQ8IW70 566 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 FDCSPQ8NFU4 85 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 OR9A4Q8NGU2 314 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
VEGFA-221ENST00000520265 SLC13A3Q8WWT9 602 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 CCT6BQ92526 530 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 NEIL2Q969S2 332 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 VPS50Q96JG6 964 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 OR4K3Q96R72 315 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 ANKHQ9HCJ1 492 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 NINJ2Q9NZG7 142 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 HCN3Q9P1Z3 774 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 MAP10Q9P2G4 905 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 C3orf18Q9UK00 162 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 FBXL4Q9UKA2 621 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 MRPS2Q9Y399 296 aaKnown RBP13.48□□□□□ -0.25
VEGFA-221ENST00000520265 KCNE2Q9Y6J6 123 aa13.48□□□□□ -0.25
VEGFA-221ENST00000520265 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
VEGFA-221ENST00000520265 COL6A6A6NMZ7 2263 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 J3QKU1 62 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 MAP2K7O14733 419 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 CLGNO14967 610 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 MMP11P24347 488 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 HNF4AP41235 474 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 GDF5P43026 501 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 HNMTP50135 292 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 ATP6V0D1P61421 351 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 KLC1Q07866 573 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 RGS1Q08116 209 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 KLRB1Q12918 225 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 CBLBQ13191 982 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 DSG2Q14126 1118 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 MINDY4Q4G0A6 757 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 GLE1Q53GS7 698 aaKnown RBP13.47□□□□□ -0.25
VEGFA-221ENST00000520265 DCAF10Q5QP82 559 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 TCTN3Q6NUS6 607 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 VN1R4Q7Z5H5 301 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 ANKRD7Q92527 254 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 THAP11Q96EK4 314 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 MVB12AQ96EY5 273 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 CYTH2Q99418 400 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 SPSB2Q99619 263 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 AIF1LQ9BQI0 150 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 MFRPQ9BY79 579 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 RBCK1Q9BYM8 510 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 TSPYL1Q9H0U9 437 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 CDC42EP4Q9H3Q1 356 aaKnown RBP13.47□□□□□ -0.25
VEGFA-221ENST00000520265 SEMA3GQ9NS98 782 aa13.47□□□□□ -0.25
VEGFA-221ENST00000520265 BOD1L1Q8NFC6 3051 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
VEGFA-221ENST00000520265 TRBC2A0A5B9 178 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 ZNF860A6NHJ4 632 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 POC1B-GALNT4F8VUJ3 575 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 SGK494L7N484 410 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 AGPSO00116 658 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 LCMT2O60294 686 aaKnown RBP13.46□□□□□ -0.25
VEGFA-221ENST00000520265 CCNT2O60583 730 aaKnown RBP13.46□□□□□ -0.25
VEGFA-221ENST00000520265 H2AFYO75367 372 aaKnown RBP13.46□□□□□ -0.25
VEGFA-221ENST00000520265 RDH16O75452 317 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 PDGFAP04085 211 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 ALPPP05187 535 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 INHBAP08476 426 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 ACPPP15309 386 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 CD1DP15813 335 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 TFEBP19484 476 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 CXCR2P25025 360 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 CRABP2P29373 138 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 HSPA7P48741 367 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 EMP2P54851 167 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 EMP3P54852 163 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 CDKL1Q00532 357 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 RELAQ04206 551 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 EEF1A2Q05639 463 aaKnown RBP13.46□□□□□ -0.25
VEGFA-221ENST00000520265 TGFBIQ15582 683 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 OR4D1Q15615 310 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 TUBB8Q3ZCM7 444 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 CYS1Q717R9 158 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 TAOK1Q7L7X3 1001 aa13.46□□□□□ -0.25
VEGFA-221ENST00000520265 PRSS41Q7RTY9 318 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms