RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 DCAF13Q9NV06 445 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 C1orf109Q9NX04 203 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SIRT5Q9NXA8 310 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SLC25A37Q9NYZ2 338 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 WWOXQ9NZC7 414 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 PKD2L2Q9NZM6 624 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 VAPAQ9P0L0 249 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 EVLQ9UI08 416 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 CRLS1Q9UJA2 301 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 LSM7Q9UK45 103 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 INTS6Q9UL03 887 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 ABT1Q9ULW3 272 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 MAPRE3Q9UPY8 281 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ERVW-1Q9UQF0 538 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 CPQQ9Y646 472 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 HSPE1-MOB4S4R3N1 261 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 MYOFQ9NZM1 2061 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 PCM1Q15154 2024 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 DOCK6Q96HP0 2047 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 NOTCH4Q99466 2003 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 C1orf232A0A0U1RR37 186 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ABHD14A-ACY1A0A1B0GW23 586 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 FAM149AA5PLN7 773 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 C16orf96A6NNT2 1141 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 LOC730098B7Z3J9 87 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 K7ERQ8 282 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 M0QX08 132 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 QSOX1O00391 747 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CXCR6O00574 342 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 KPNA5O15131 536 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 DFNA5O60443 496 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SCN2BO60939 215 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 EFCAB14O75071 495 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ULK1O75385 1050 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 GMNNO75496 209 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SEC14L2O76054 403 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 RECQL5O94762 991 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 CLDN7O95471 211 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SNAP29O95721 258 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 URODP06132 367 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ABCB1P08183 1280 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 GNAO1P09471 354 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 C1SP09871 688 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 OR56A5P0C7T3 313 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 THRBP10828 461 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 IRF1P10914 325 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 BCKDHAP12694 445 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SRCP12931 536 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 HSD3B1P14060 373 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SLC2A4P14672 509 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 NCK1P16333 377 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ZNF30P17039 623 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CTPS1P17812 591 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 DDX6P26196 483 aaKnown RBP eCLIP4.89□□□□□ -1.63
SDC2-204ENST00000519914 HSD3B2P26439 372 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 GSTM2P28161 218 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 RYKP34925 604 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CASP2P42575 452 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 MAGEA10P43363 369 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 MAPK9P45984 424 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SPINT3P49223 89 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 EPHA5P54756 1037 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 TMBIM6P55061 237 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CXCR4P61073 352 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 RPS14P62263 151 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 RPL38P63173 70 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 PHC1P78364 1004 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CSTF3Q12996 717 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 PTPRRQ15256 657 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 BCL2A1Q16548 175 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 MAPKAPK3Q16644 382 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 C18orf21Q32NC0 220 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 DGKKQ5KSL6 1271 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 LIPJQ5W064 366 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CPZQ66K79 652 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 GTF2IRD2BQ6EKJ0 949 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 KIAA1841Q6NSI8 718 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 C22orf39Q6P5X5 142 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SCIMPQ6UWF3 145 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 USP45Q70EL2 814 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 GAREM2Q75VX8 874 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 PIWIL3Q7Z3Z3 882 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 NANOGNBQ7Z5D8 188 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CAMKMTQ7Z624 323 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 SERPINA11Q86U17 422 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 GTF2IRD2Q86UP8 949 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ZNF786Q8N393 782 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ZCCHC7Q8N3Z6 543 aaKnown RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 LIX1Q8N485 282 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ARL14EPQ8N8R7 260 aaPredicted RBP4.89□□□□□ -1.63
SDC2-204ENST00000519914 GPR26Q8NDV2 337 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 OR5K1Q8NHB7 308 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ITFG1Q8TB96 612 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 CSGALNACT1Q8TDX6 532 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 TMBIM1Q969X1 311 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 ESAMQ96AP7 390 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 NACC2Q96BF6 587 aa4.89□□□□□ -1.63
SDC2-204ENST00000519914 C12orf43Q96C57 262 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms