RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ABHD11Q8NFV4 315 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 OR11G2Q8NGC1 345 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ANKRD49Q8WVL7 239 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ANKRD7Q92527 254 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 MIB2Q96AX9 1013 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 MIEF2Q96C03 454 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 PYCR2Q96C36 320 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 FBXL8Q96CD0 374 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 THAP11Q96EK4 314 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 MVB12AQ96EY5 273 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 MMABQ96EY8 250 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 SLX1AQ9BQ83 275 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 MFRPQ9BY79 579 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 TRIM54Q9BYV2 358 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 TGIF2Q9GZN2 237 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ZBTB20Q9HC78 741 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 SAYSD1Q9NPB0 183 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ARL15Q9NXU5 204 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ZFATQ9P243 1243 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF282Q9UDV7 671 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 NOVA2Q9UNW9 492 aaKnown RBP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF462Q96JM2 2506 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 A0A0A6YYC8 382 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 FAM95CA0A1B0GW59 222 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 TTLL8A6PVC2 850 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 I3L1I5 382 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 NDC80O14777 642 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 DPM1O60762 260 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 DNAJB6O75190 326 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 ALOX12BO75342 701 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 SORBS2O94875 1100 aaKnown RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 WISP3O95389 354 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 GUCA1CO95843 209 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 CCDC159P0C7I6 412 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 CDH1P12830 882 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 BCL6P41182 706 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 EFNA3P52797 238 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 EMP2P54851 167 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 PLTPP55058 493 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 AP1S2P56377 157 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 RPS15AP62244 130 aaKnown RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 TBPL1P62380 186 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 GUCY2DQ02846 1103 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 SRSF1Q07955 248 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 AIMP2Q13155 320 aaKnown RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 DSG2Q14126 1118 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF460Q14592 562 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 CRB2Q5IJ48 1285 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 CATSPEREQ5SY80 951 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 CAPN13Q6MZZ7 669 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 ZDHHC24Q6UX98 284 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 CAPN12Q6ZSI9 719 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 HPS6Q86YV9 775 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 NKAPQ8N5F7 415 aaKnown RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 Q8NA96 180 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 KCT2Q8NC54 265 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF740Q8NDX6 193 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 RERGQ96A58 199 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 SARGQ9BW04 601 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 YIPF2Q9BWQ6 316 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 RHOJQ9H4E5 214 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 TRPC4Q9UBN4 977 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 CDC23Q9UJX2 597 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 C3orf18Q9UK00 162 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 FBXL4Q9UKA2 621 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 NXT1Q9UKK6 140 aaKnown RBP8.87□□□□□ -0.99
HDAC3-215ENST00000519474 MAP4K5Q9Y4K4 846 aa8.87□□□□□ -0.99
HDAC3-215ENST00000519474 FAM159BA6NKW6 160 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 IDSB3KWA1 339 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 KLHL18O94889 574 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 BMP10O95393 424 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 ENO2P09104 434 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 FOSL1P15407 271 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF37AP17032 561 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 FBLP22087 321 aaKnown RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 CCND1P24385 295 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 MAGEA4P43358 317 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 KCNC1P48547 511 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 MAT1AQ00266 395 aaKnown RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 SLC7A5Q01650 507 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 MEF2AQ02078 507 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 CALCOCO2Q13137 446 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 INPP5JQ15735 1006 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 RBBP7Q16576 425 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 NDUFA9Q16795 377 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 PPP1R3AQ16821 1122 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 C18orf21Q32NC0 220 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 VWA5B1Q5TIE3 1220 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 SLC6A19Q695T7 634 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 TMEM214Q6NUQ4 689 aaKnown RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 IGFL2Q6UWQ7 119 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 PRSS41Q7RTY9 318 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 SPATA6LQ8N4H0 392 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 MFSD9Q8NBP5 474 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 OR9A4Q8NGU2 314 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 FBXO25Q8TCJ0 367 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 SLC13A3Q8WWT9 602 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 PSMF1Q92530 271 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 C8orf44Q96CB5 159 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 MOCOSQ96EN8 888 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms