RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 TSSK1BQ9BXA7 367 aa7.9□□□□□ -1.14
CTNNA1-215ENST00000519309 RASSF1Q9NS23 344 aa7.9□□□□□ -1.14
CTNNA1-215ENST00000519309 IMPACTQ9P2X3 320 aa7.9□□□□□ -1.14
CTNNA1-215ENST00000519309 MRFAP1Q9Y605 127 aa7.9□□□□□ -1.14
CTNNA1-215ENST00000519309 A0A1B0GTH9 108 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 GRID2IPA4D2P6 1211 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 OR51F1A6NGY5 319 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 FAM171A2A8MVW0 826 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 TXNDC9O14530 226 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 P2RX6O15547 441 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 OR1I1O60431 355 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 ATE1O95260 518 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 NSA2O95478 260 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 C1orf105O95561 183 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 APOA4P06727 396 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 INHBBP09529 407 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 AOAHP28039 575 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CMPK1P30085 196 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 HOXC12P31275 282 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 TRHRP34981 398 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 PEX19P40855 299 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CCNFP41002 786 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 BDKRB1P46663 353 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CSE1LP55060 971 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 DLX5P56178 289 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 NUP107P57740 925 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 TAS2R50P59544 299 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 YBX1P67809 324 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 MAT1AQ00266 395 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 OC90Q02509 493 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 PDAP1Q13442 181 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 PTK6Q13882 451 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 PRPSAP1Q14558 356 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 USP10Q14694 798 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 TMED2Q15363 201 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 ZNF468Q5VIY5 522 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 FBXO42Q6P3S6 717 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 ARHGAP11AQ6P4F7 1023 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 LRRC8BQ6P9F7 803 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 PAPD4Q6PIY7 484 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 AFTPHQ6ULP2 937 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CCDC71Q8IV32 467 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CDKL3Q8IVW4 592 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CCDC170Q8IYT3 715 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 LRRC57Q8N9N7 239 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 ZFP62Q8NB50 900 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 OR13J1Q8NGT2 312 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 C16orf52Q8NHV5 167 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 SPATA13Q96N96 652 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 PANX2Q96RD6 677 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 SMR3AQ99954 134 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 FERMT1Q9BQL6 677 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 GPATCH1Q9BRR8 931 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 SARGQ9BW04 601 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 YIPF2Q9BWQ6 316 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CARD6Q9BX69 1037 aa7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 KLF13Q9Y2Y9 288 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 EPN1Q9Y6I3 576 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-215ENST00000519309 CCDC162PA2VCL2 907 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 KRT87PA6NCN2 255 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 PJA2O43164 708 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 PRMT3O60678 531 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 ZNF189O75820 626 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 RAF1P04049 648 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 PKMP14618 531 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 TPP2P29144 1249 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 CTNNA1P35221 906 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 CYLC1P35663 651 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 XCR1P46094 333 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 AVPR1BP47901 424 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 SNRPNP63162 240 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 ACVR1Q04771 509 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 POU6F1Q14863 301 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 MAPKAPK3Q16644 382 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 NDUFA9Q16795 377 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 DEFB113Q30KQ7 82 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 SLC25A35Q3KQZ1 300 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 MINDY4Q4G0A6 757 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 CCSMST1Q4G0I0 132 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 TMEM198Q66K66 360 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 TTC23LQ6PF05 361 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 CLEC9AQ6UXN8 241 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 Q71RC1 249 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 CDC20BQ86Y33 519 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 CCDC50Q8IVM0 306 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 ZZZ3Q8IYH5 903 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 CFAP61Q8NHU2 1237 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 ELP5Q8TE02 316 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 RERGQ96A58 199 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 TMEM125Q96AQ2 219 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 COX4I2Q96KJ9 171 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 LPAR4Q99677 370 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 DESI2Q9BSY9 194 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 SLC6A16Q9GZN6 736 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 LRRC40Q9H9A6 602 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 RIMKLBQ9ULI2 386 aa7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 PACSIN2Q9UNF0 486 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-215ENST00000519309 PCDHA3Q9Y5H8 950 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms